Gene Phep_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0493 
Symbol 
ID8251580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp587836 
End bp590139 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content43% 
IMG OID644934143 
Producthypothetical protein 
Protein accessionYP_003090779 
Protein GI255530407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATACAT TACGTTATTT CCTGATCGCA TTGCTATTCC CCTTCTCTGT GCTGGCGCAG 
CAGAAGACCA AGATCATTGT TGAGCGATGG GATGCCACTA CAACCAATGC TGCAGATAAG
GCCAATAGAA TTTCTTATTT TAGAAAACCC GTCTTCCGGC AGGACAATGC CAGGTTATTT
TGTGATAGCG CTGTTTTTTA TCCCGACAAG AATATTTTCG ATGCCTTCGG AAATGTACAC
ATCAACCAGG CTGATACCAT CAACATTTAT TCCGACCGCT TAAATTATAA CGGAAATACC
AAGATGGCGC ATTTAACCAG TAATGTGCGG ATGGTAGATA ATGAAAATGT ACTGACCACC
AATATCCTGG ATTATAACAT GGCCTCGAAA GTTGGGACGT ACGTTAGTGG TGGCAAAATT
GTAAATAAGG ACGTAACACT CACAAGCAAG AACGGCTATT ATTTTTCAAA TAGCCGCGAT
GCCTATTTCA GGTACAATGT GGTGGTGGTA ACCCCTGAAT CGCGGATCAC TTCTGATACA
CTGAGGTACA ATACCTTAAC CAACTGGACT TATTTTTACG GGCCTACCAA TATTAAAGGC
AAGGACGATA ATTTATATAC AGAAAACGGA GCTTACAACA CCCGTACCCA ATATGCCTAT
TTCGGGAAAA AAAACCTGTA CACGATGAAT ACCAAATCGT TAAAAGGGGA CAGCTTGTAC
TATGACGGCA TTGCCGGCTA TGGAAAAGCG GTAAGGAACA TTGTATTTAA GGATACGGCA
GACAAGACAG TGATGTACGG ACAGCTCGGC TTTTATTACA AAAAAGATGA AAGGACTCTG
GTTACCAAAA ATCCTTACGT AGGTATGGGT ACCGCTGATT CTATAAAAGT TAACAACAAA
TTGCAACCAG ACAGCTTATG GATGGGCGCT GATACGCTGG AAACACAAAT GGTGCTGAAG
AAATCACTGG TACTGATTTC CTCGCCGGTC ATCAAAAAGG ACAATGAACT GGGCGAGGCT
GAAGAAGAAG AGGGGAAAAA AGAAGCCAAG GTGGGCGCAA CTAAAAAAGC AGCGGTAACA
GAAGATACCG GCGTAAAGAA GCGACCGGAC AAACCCGATA AAAAGAACAG TAAAACGGAT
AAAGAGAAGA ATAAAAACCT GCCTGAAAAA GCCAGAGATA CCCTGACAAA AGAGAGCATA
TCGAAAGATA GTGTCTCGAA AGACAGCACC ATTCTTCATA AAATCCCTCC GCAGGTAAAA
GATTCCCTGC TGATTTCAAA GGCTGATGCT TTGGTTAAGA CCGGAAAGGA TAGCCTGGCA
AAATCCCTGA AAGCTGTACC TGCACTGAAT GCCAGGACCG ACACTTTGAC AAAAGGAAAA
GCCAGTGCTG AAAAGTTGAA AAATGCAGTT CCGGCAGCAA AGCAACTGGC TAACCAGGCG
CAGGCTAAAA AGCCCCTGCT CAAAGATTCG ATCCCCTTTA ACCCTGAAGA CACGGTCAGG
ACAAGGGTCA TTAAAGCTTA CCATAATGTT CGGGTATACA AAGCGAACAT GCAGGCCAAA
GCCGATTCAT TGTTTTATAC CAGTGCCGAC TCTACCCTGC GGTGGTACAA AAACCCTATC
CTGTGGTCGG AAGGCTCGCA GCAAACCGGT GACACCATTT ATTTACAACT GAAAAACAAA
AAATTAAATA CACTGCAGGT GTTGCAGCAA GCTTTTCTGG TCAACGTCAA TGCCGATTCG
GCCAGGCATA ACCAGATCAA AGGAAAGCTC ATCACTGCCT TCTTTAAAGA TGGGAAATTA
AAAAACATGT TTGTAGACGG GAATGCGGAG AGTATTTATT ACAACCAGGA CGACAAAAAT
GCTTATACCG ACATGAACCA GACGGTAAGC AGCCGGATAA AAATACTATT TAAAGAAAAG
CAGATTGAAA AAATTGTAAC CATAAGAGAC CCTGAAGGGG TGAGGACGCC GATGCCGGAG
TTAAAAGAAG ATGTTTTTCT TACCGGATTT ATCTGGAGGC CTGAGCAAAG GCCGCTTTCT
AAAAAAGAAG TGATCAATGG CAAGCCCAAA TCCAAACCTG TGGCTAAGAA AGCCGCTGGG
GTACAAACGC ACCCAAAAAC AATTGGCAAA GGACTGAACG CAAAGGACAA ACCTTTAATT
AAAAACATTC CTGTATCTAA AAAAGATAGC ATTGCGGTTA AGCCTGTTTT ACTGAAAGCA
GATAGCCTGA TGAAAACATT GCCTGCAAAA CAAAAAGACA CGTTAAAAGC CAATACGGCT
AGGCCTGTTC CTTTAAAAAA GTAA
 
Protein sequence
MHTLRYFLIA LLFPFSVLAQ QKTKIIVERW DATTTNAADK ANRISYFRKP VFRQDNARLF 
CDSAVFYPDK NIFDAFGNVH INQADTINIY SDRLNYNGNT KMAHLTSNVR MVDNENVLTT
NILDYNMASK VGTYVSGGKI VNKDVTLTSK NGYYFSNSRD AYFRYNVVVV TPESRITSDT
LRYNTLTNWT YFYGPTNIKG KDDNLYTENG AYNTRTQYAY FGKKNLYTMN TKSLKGDSLY
YDGIAGYGKA VRNIVFKDTA DKTVMYGQLG FYYKKDERTL VTKNPYVGMG TADSIKVNNK
LQPDSLWMGA DTLETQMVLK KSLVLISSPV IKKDNELGEA EEEEGKKEAK VGATKKAAVT
EDTGVKKRPD KPDKKNSKTD KEKNKNLPEK ARDTLTKESI SKDSVSKDST ILHKIPPQVK
DSLLISKADA LVKTGKDSLA KSLKAVPALN ARTDTLTKGK ASAEKLKNAV PAAKQLANQA
QAKKPLLKDS IPFNPEDTVR TRVIKAYHNV RVYKANMQAK ADSLFYTSAD STLRWYKNPI
LWSEGSQQTG DTIYLQLKNK KLNTLQVLQQ AFLVNVNADS ARHNQIKGKL ITAFFKDGKL
KNMFVDGNAE SIYYNQDDKN AYTDMNQTVS SRIKILFKEK QIEKIVTIRD PEGVRTPMPE
LKEDVFLTGF IWRPEQRPLS KKEVINGKPK SKPVAKKAAG VQTHPKTIGK GLNAKDKPLI
KNIPVSKKDS IAVKPVLLKA DSLMKTLPAK QKDTLKANTA RPVPLKK