| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0483 |
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| Symbol | |
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| ID | 8251570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 578297 |
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| End bp | 579157 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934133 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003090769 |
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| Protein GI | 255530397 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA ACCTGTTTAA AGATTTAAAG TATAAGGTAT TCCAGTCCGG CAATCCTGTA
TACTTTTATA TAGGCATCAA TGTCATTATT TTTGTGGCAT TTGCGCTGAT CAATATCCCT
TTCTTTCTTT CTGGAAATGG TGGTGGCATT TACAGCGGAT GGATCAGGGA ATATGCAGGC
TTTCCGGCCG ATTTGGCCAA ACTGCCAGTT CGGTTTTACG CCATTTTAAC CTACCAGTTT
TTTCATGATG GCCTGCTGCA CATTTTATTT AATATGTTGT GGCTGTTCTG GATGGGAAGA
ATTTTTCTAG ACTTTTTAAA GCCACGTCAG TTTCATTTTG TATACCTGGC AGGTGGTTTT
GCCGGGGCAT TGCTGTATTT GCTGGCCTAC AATATTTTTC CTGTATTTGC AACTGCTTTG
CCGCAGGCCA CAATTATAGG ATCCTCAGCT TCAGTAATGG CCGTTATAGT GGCAGCCGCT
ACCTTAGTGC CCGATTACAG CATCAGGCTG CTTTTTTTAG GTGATGTAAA ATTGAAGTAT
CTTGCATTGG CATATATCGT ATTGGACCTG ATTGGGATGG CAACTACAGA TGCGGGCGGA
AGCTTTGCCC ATCTTGGCGG TGCTGTATTG GGTTTTACGT ATATTAAACT GTTGAGAAAG
GGGACAGACT GGAGCAGCCT GTTTAAACGT AAACCAAAAT TAAAAGTGGT TAGAAATGAG
TTTGCAAAAC AGGGTGCTAA AAAGGCAGAT GCCGTAAACC AGGAAGAGAT AGACAGAATA
TTGGATAAAA TCTCAAAATC TGGTTACGAT AAACTAAATA AGGAAGAAAA GGAAACTTTA
TTCAAGGCGA GTAAACATTA A
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| Protein sequence | MNNNLFKDLK YKVFQSGNPV YFYIGINVII FVAFALINIP FFLSGNGGGI YSGWIREYAG
FPADLAKLPV RFYAILTYQF FHDGLLHILF NMLWLFWMGR IFLDFLKPRQ FHFVYLAGGF
AGALLYLLAY NIFPVFATAL PQATIIGSSA SVMAVIVAAA TLVPDYSIRL LFLGDVKLKY
LALAYIVLDL IGMATTDAGG SFAHLGGAVL GFTYIKLLRK GTDWSSLFKR KPKLKVVRNE
FAKQGAKKAD AVNQEEIDRI LDKISKSGYD KLNKEEKETL FKASKH
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