| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0474 |
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| Symbol | |
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| ID | 8251561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 565163 |
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| End bp | 567784 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934124 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003090760 |
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| Protein GI | 255530388 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCC GCATCACTAA ACAAACAATC AAATATCAAA TTATGAAAAA AGTATTACTT
TTCATCCTCC CATTTTTGCT TTCGGCAAGC TTTACTTTTG CTCAAAGCCA GATAACGGGT
ATTATAAAGG GGGCGAATGG TGCTCCTGTA CCCAATGCCA CTGTGCTCAT CAGAGGCACA
AAAATCACTA CACTGGCTAA TGATAAAGGT GAATTCAGCA TCAGTACAAA ACAGGAGCCC
CCATTCTATC TTCAAGTCAG CTCCGTTGGC TATAAAGCCC AGGATTTTCA GATCCTGAAA
TTTCAGGATA CGCCTTTGGA ATTAACCCTG GTTGAAAATG CAGAGCTGGA CGAAATTGTT
GTAACTTCAA GAAGACGGTC GGAGGTTTTA CAGGATGTGC CCATCGCAAT CACAGTTATT
GGTGGTCAGG CTGCAGAAAA CGCAGGGGCA TTTAACGTTA ACCGTTTAAA AGAACTGGTA
CCTTCAGTAC AGCTCTATGC TTCAAACGCA AGAAACACTA CACTTAACAT CCGGGGATTG
GGCTCAACAT TTGGATTAAC CAATGACGGT ATTGATCCGG GAGTAGGTTT TTATGTTGAT
GGAGTTTACC AGGCCCGTCC TGCAGCTACT TCTACAGATT TTCTTGACAT AGAACAGATA
GAAATCCTGC GTGGCCCACA GGGCACCTTA TTTGGTAAAA ATACAACCGC GGGTGCCTTC
AACATCACCA CCACAAAACC GACCCTGGTT CCAACAGCAA AAGTTGAACT GAATGTTGGA
AACTACAATT TTATACAAGC AAAAACTTCG GTTTCAGGTG CAGTAGCAAA AAATCTTGCA
GCAAAGTTAG CCATATCGGG TACTCAAAGA GATGGTACAA TTTACAATAC CAGAGAAGAA
CGCAGATACA GCGGCCAAAA CAATCTTGGT TTTAAAGGCG CTTTGTATTT TACGCCCTCA
GATAAATTAC AGGTGTTGTT AAGCAGTGAT GTAAGCATTC AGCACCCGGC AGGCTATCCA
CTGGTAATTG CCGGTGTAAC TGCTACAGAA AGAAGCGCTT ACCGTCAGTA TGCCAAAATT
GTTTCTGATT TAGGATATCA GCAACCTAAA ATAGACCCTT TTTCAAGAGA GATCAACACC
AATACGCCAT GGAAACAGGA TCAGTCAATT GGCGGGATAT CTTTAAATGT GGATTATAAG
ATCGGAAACG GAACACTTAC TTCAACTACC GCCTGGAGAT TCTGGAACTG GGATCCTACA
AATGACAGGG ATTTCTCTGA GTTGTCGGCC CTAACCAAAT CACAAGGTAA CTCGCGTCAT
GACCAGTATT CTCAAGAAGT GAGATATGCT GGTAATCTCA CAGAAAAATT AAGCGGGGTG
ATCGGTGTAT TTGCGCTTGC CCAGAATTTG AAGGGTCTGT CCCAGACTGA AGAGGTGGGT
AAAGATCAAT GGAGATTTGT ACAAACAGCT GCAACCGGTG CTCAGGCAGG GTACACTACA
CCTGGTCTGC TGGATGGCTT TGGCATCAAA ACCAATTCAA CCATTAAATC GTTAAGTGCG
GCTATCTTTG CACAGGCCGA TTGGGAATTT ATAGAACACC TGCATGTTTT ACCTGGTTTA
AGGTTCACTT ACGATAAAAA AGATGTGGAT TATGACAGGG TAACTTATGG TGGTCTTCAA
ACTACTGACC CTGCTCTGCT TGCCCTTAAA GCTGCTGTGT ATGCCAATCA GCAGTTCAAT
ACCAGTACAG ATAACAATAA TTTGTCTGGA AACATTACCT TGTCCTACCG TCCTACTACC
AAGTTAAACG TTTATGGAAC TTTCTCTACC GCCTATAAAC CAGTTGGGGT AAATGTTGGG
GGCTTGCCAA CTACCAGCAC CGGAGAAGCA GATCTATCTC TTGCTGTCGT AAAACCGGAA
TATGTTCAGC ACTATGAGTT CGGTTTAAAA ACAAAACCTG TGAAAGGTGC GATTGTAAAT
TTAACCGCCT TTAATACAGA TATTAAAGAT TACCAAACCA ATGTACAATC TCCTCAGCTG
GGTGTAAACA GGGGGTATCT TGCAAATGCA GAAAAAGTGA ACGTAAAAGG TCTGGAAGTT
GATGGAAGTT ACCAGCTGGA AAGGTTTTTA ACTTTAAATG CAGCTGTAGC TTACCTGGAT
GGTAAATATA AAAAATTTAC CAATGCACCG CTACCTTTGG AAGAAACCGG CCATACAGAA
CTTGTTAATG GCGTAGCTAC CCAGGTGGCC TTTAAAGATG CTTCCGGAGG ACGATTGCCG
GGGATCTCTA AATGGAATGC TTCCGGTGGT GCCGAGTTTA GTACTCCTGG CAAAGTAGGT
ACAAGAGACG GCAGGTTTTT TATTGCAGGT GATATCAGCT ACCGTTCAGA ATACTCTTCA
AACCCAACAC CTTCAAAAGT ATTAAATGTT GATGGTTATA CCCTGGTGAA CGCAAGAATT
GGATTCAAAT CGGATAAAAT CTCCATTTTT GGCTGGAGCA GAAATATTGG AAATACCAAG
TACTTCGAAC AATTGCAGGC AGCAGCAGGT AACTCCGGTT TGTATGCAGG TGTACTTGGC
GACCCAAGAA CTTATGGGGC TACATTGCGT TATGCTTTTT AA
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| Protein sequence | MDFRITKQTI KYQIMKKVLL FILPFLLSAS FTFAQSQITG IIKGANGAPV PNATVLIRGT
KITTLANDKG EFSISTKQEP PFYLQVSSVG YKAQDFQILK FQDTPLELTL VENAELDEIV
VTSRRRSEVL QDVPIAITVI GGQAAENAGA FNVNRLKELV PSVQLYASNA RNTTLNIRGL
GSTFGLTNDG IDPGVGFYVD GVYQARPAAT STDFLDIEQI EILRGPQGTL FGKNTTAGAF
NITTTKPTLV PTAKVELNVG NYNFIQAKTS VSGAVAKNLA AKLAISGTQR DGTIYNTREE
RRYSGQNNLG FKGALYFTPS DKLQVLLSSD VSIQHPAGYP LVIAGVTATE RSAYRQYAKI
VSDLGYQQPK IDPFSREINT NTPWKQDQSI GGISLNVDYK IGNGTLTSTT AWRFWNWDPT
NDRDFSELSA LTKSQGNSRH DQYSQEVRYA GNLTEKLSGV IGVFALAQNL KGLSQTEEVG
KDQWRFVQTA ATGAQAGYTT PGLLDGFGIK TNSTIKSLSA AIFAQADWEF IEHLHVLPGL
RFTYDKKDVD YDRVTYGGLQ TTDPALLALK AAVYANQQFN TSTDNNNLSG NITLSYRPTT
KLNVYGTFST AYKPVGVNVG GLPTTSTGEA DLSLAVVKPE YVQHYEFGLK TKPVKGAIVN
LTAFNTDIKD YQTNVQSPQL GVNRGYLANA EKVNVKGLEV DGSYQLERFL TLNAAVAYLD
GKYKKFTNAP LPLEETGHTE LVNGVATQVA FKDASGGRLP GISKWNASGG AEFSTPGKVG
TRDGRFFIAG DISYRSEYSS NPTPSKVLNV DGYTLVNARI GFKSDKISIF GWSRNIGNTK
YFEQLQAAAG NSGLYAGVLG DPRTYGATLR YAF
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