| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0468 |
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| Symbol | |
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| ID | 8251555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 554373 |
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| End bp | 555920 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934118 |
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| Product | PspC domain protein |
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| Protein accession | YP_003090754 |
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| Protein GI | 255530382 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA CACACAACAT AAATATTGGG AACTCTATTG TTCATATAGA AGAGGACGCC
TACGAAATGC TTACCCTTTA CCTGAACGAA GTGAAGCAGC ATTTTGCAAG GAATGCAGAC
GATTTTGAGA TTGTAAAGGA TATTGAGAAT AGGATAGCCG AAATGTTTGC CGAAATGCTT
GCTGCACAGC AAAAGCAGGT GATCAGTACA GCAGATGTGC AGGCTGTAAT TCAACAGATG
GGTTCTGTAA AGGATTTTGA AAACTCTGAA GAATCCGATG AGGGTTATAC GGCCCCGCCA
GAATTTGACC CGATTAAAAA ACTATACAGG GATACAGACC AGGCCATGAT AGCTGGTGTT
TGTGCAGGTA TGGCGCATTA CCTGGATATA GACGTGAAGT GGACCAGACT GTTTACTTTT
CTGATCATTT TTCTTTTCGG GGCAGGTATA CTGGCCTATA TCATTTTCTG GATCATGGTA
CCCAAGGCTA CAACCAGATT TGAACGCATG TCTATGTATG GCGAAGAACC TACCCTTCGC
GGCTTTGCCA ACAGTCAGCA CCCCCTCGTT AAACAGTCGC GCGGCTTTAT TGCCGAATTT
TTTGATGTGC TGGCCAACTT TCTCCAGGGT AGTGGTAAGC TGATCCTTAA AATTATTGCA
GTGGGCATAG CCATTTTTGG ATCGATGGTA TTGTTAGGCC TTATTGTGAC CATCGCTGCT
TTATTTGGCT TCTGGGATGC CAATGTGTTT ACTTATTTTC CACTGAACAT CATTAACCAG
GAATATATTC CGGCCATTTT CTTAGCCTTC TTTACAGTAA TCGGCATACC TGTTCTGGCC
CTTATCCTGT TTTCTATACG CGTGGCCTTC AATGGCAGGG CCATTCATAA AACCTTTTCT
TTTGGTTTAC TTATCGTCTG GCTTGGCGGT GTGGTGTTCA GCATCTTTTA TATCGCTAAA
ATATCTTCTG AATTTAAAGA GCATGCCGAG TTTACGCAGG TGACTGAATT TAAACCTTAT
AAAGTCTATA CCCTGGAGAT CGACAGGTCG CGCTTTTTTA CGAAGGAAGA CAGCCTGAAC
TATCGGATAG ATCCTAAGGA TTATAAGGGA AGAAGAATCT TAAATGAACT TGATGGGGCT
TTTGACATTC CCAGAAACAT TAAACTGAAG ATTGAAAAAA GTGAGGATGG TAAAGTGACT
TTGGTCCAGA ATTATAAATC TCAGGGAAAG ACTTTTGAAA TTGCCCTGCA GCATGCCAAG
AACATTCAAT ACAACTACCT GCAGCAGGAT TCCCTGCTTA CCTTTAGCCC GATACTACAA
CTCAAGCCTG GACTGAACTG GCGCGGACAG GAAATAGAGC TGCTGCTTAA GGTTCCTGCA
GGTACCATTT TGAACATCAG GCGCGAACTT GAATGGTACC TTGCCGGTTA CGACTATGGG
CGTTGCAATG AAGAGGCAAG AGGTGACCAA TACAACGAAT GGATCATGAC CCCATCTGGC
CTGGAATGTA AAAATCCAGT TGTGGCGCCT TCAAAACACG AAGATTAA
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| Protein sequence | MKKTHNINIG NSIVHIEEDA YEMLTLYLNE VKQHFARNAD DFEIVKDIEN RIAEMFAEML
AAQQKQVIST ADVQAVIQQM GSVKDFENSE ESDEGYTAPP EFDPIKKLYR DTDQAMIAGV
CAGMAHYLDI DVKWTRLFTF LIIFLFGAGI LAYIIFWIMV PKATTRFERM SMYGEEPTLR
GFANSQHPLV KQSRGFIAEF FDVLANFLQG SGKLILKIIA VGIAIFGSMV LLGLIVTIAA
LFGFWDANVF TYFPLNIINQ EYIPAIFLAF FTVIGIPVLA LILFSIRVAF NGRAIHKTFS
FGLLIVWLGG VVFSIFYIAK ISSEFKEHAE FTQVTEFKPY KVYTLEIDRS RFFTKEDSLN
YRIDPKDYKG RRILNELDGA FDIPRNIKLK IEKSEDGKVT LVQNYKSQGK TFEIALQHAK
NIQYNYLQQD SLLTFSPILQ LKPGLNWRGQ EIELLLKVPA GTILNIRREL EWYLAGYDYG
RCNEEARGDQ YNEWIMTPSG LECKNPVVAP SKHED
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