Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0467 |
Symbol | |
ID | 8251554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 554009 |
End bp | 554365 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934117 |
Product | transcriptional regulator PadR family protein |
Protein accession | YP_003090753 |
Protein GI | 255530381 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.560636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGCAG AAAATACGCA AACACAAATG CGGAAGGGCA TACTGGAATA CTGTGTGCTG CTTATAATAT CGAGAGGTGA AATTTATGCT TCCGATATCA TTACCGAATT GAAACAGGCT AAACTGTTGG TAGTAGAGGG TACGCTTTAT CCACTGCTTA CCCGCCTAAA GAACAATGGT TTACTGAGCT ACAATTGGGT AGAGTCTACT TCCGGACCAC CACGTAAATA TTACGTGCTC ACTGAAGATG GCAAGGCCAT TTTGAAACAG CTTGACAATA CCTGGCAGGA ACTGGCTTAT GCCATCAATA CTTCAAAAAA AGTGGCTGAC CAGAATTCAA AGGATCAATT AATTTAA
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Protein sequence | MIAENTQTQM RKGILEYCVL LIISRGEIYA SDIITELKQA KLLVVEGTLY PLLTRLKNNG LLSYNWVEST SGPPRKYYVL TEDGKAILKQ LDNTWQELAY AINTSKKVAD QNSKDQLI
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