Gene Phep_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0467 
Symbol 
ID8251554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp554009 
End bp554365 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content41% 
IMG OID644934117 
Producttranscriptional regulator PadR family protein 
Protein accessionYP_003090753 
Protein GI255530381 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.560636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCAG AAAATACGCA AACACAAATG CGGAAGGGCA TACTGGAATA CTGTGTGCTG 
CTTATAATAT CGAGAGGTGA AATTTATGCT TCCGATATCA TTACCGAATT GAAACAGGCT
AAACTGTTGG TAGTAGAGGG TACGCTTTAT CCACTGCTTA CCCGCCTAAA GAACAATGGT
TTACTGAGCT ACAATTGGGT AGAGTCTACT TCCGGACCAC CACGTAAATA TTACGTGCTC
ACTGAAGATG GCAAGGCCAT TTTGAAACAG CTTGACAATA CCTGGCAGGA ACTGGCTTAT
GCCATCAATA CTTCAAAAAA AGTGGCTGAC CAGAATTCAA AGGATCAATT AATTTAA
 
Protein sequence
MIAENTQTQM RKGILEYCVL LIISRGEIYA SDIITELKQA KLLVVEGTLY PLLTRLKNNG 
LLSYNWVEST SGPPRKYYVL TEDGKAILKQ LDNTWQELAY AINTSKKVAD QNSKDQLI