Gene Phep_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0464 
Symbol 
ID8251551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp550187 
End bp552433 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content43% 
IMG OID644934114 
ProductTonB-dependent receptor plug 
Protein accessionYP_003090750 
Protein GI255530378 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTG TCCTTACTTT TGCTCTTTTT GTTAGTTATT TCCTGTCTGC TTCAGCCCAA 
TCGGGCAGTA TAGGCGGACA GGTCATTTCC GAAGGCCAGC CGCTCCAGGC GGTTACCCTG
ATTTTGCAGG GCAGCACTCT GGCTACAAAA ACAGACAGTA TGGGAAATTA TGTTTTTAGC
AAAATTGCCG CGGGTACATA TCAAGTTCAG GCCACTGCAA TTGGTTTTAG AAAAACACTT
AAATCAGTTG TATTGAAAGC AGATGAGTAC AGGGCACTGA ATTTTGACCT CAGTAATTTT
CAAAACGACC TGAATGAAGT AGTGGTTACG GGGACTTTAA AAGAGGTGAA GCGTTTGGAA
AGCCCTGTTC CGGTAGAAGT ATATACCCCC GCTTTTTTTA GGAAAAACCC TACACCAAGT
ATTTTTGAGG CACTTCAAAA TGTAAACGGT GTAAGGCCGC AATTGAACTG CAACATCTGC
AATACCGGGG ACATTCATAT CAATGGCCTG GAGGGCCCTT ACACCATGAT CCTGATTGAT
GGGATGCCTA TTGTAAGCAG CTTATCAAGT GTATACGGAC TTTCGGGGAT CCCGAACTCA
CTGGTAGAAC AGATAGAGAT TGTTAAAGGG CCTGCATCGT CCTTATACGG AAGCGAGGCG
GTAGGGGGCT TAATCAATAT CATTACCAAA AAGCCGCAAA ATGCCGCTTT ATTTTCTGCT
GATATTTTTA CTACCAGTTA TCAGGAATGG AATGCCGATC TGGGTTTTAA GTTTAAAGCG
AATAAAAAAA CAGATGTGCT GACCGGTGTA AATTACTTTA AATATGGCCA TCCCGTAGAC
CATAACCACG ATAACTTTAC CGATGTGACC CTGCAGGACC GCATTTCGGT ATTTCAGAAA
TGGAATTTTA AAAGGAAGTA CAACCGGATC TTTACATTGG GTGGCAGGTA TGTGTATGAA
GACCGATGGG GTGGCGAGAT GCAATGGAAC AAATCTTACC GGGGTGGGGA TCAGGTGTAT
GGGGAAAGCA TTTATACCAA CCGCTGGGAG CTGATCGGAA ATTACCAGTT GCCGGCAGCT
GAAAAACTAT TCCTTGCTTT TTCCTATAAT GAGCACAATC AGGATAGCAG GTATGGAACT
ACCTCTTATA TTGCCAAACA GAAAATCGGC TTTGCCCAGC TAACCTGGGA CAAGCAATTG
CGGAACCACG ACCTGCTGTT TGGCGCTGCA CTGCGCTATA CTTATTACGA CGACAATACG
CCGGCTACAA CCGGATTGAA CCAGGACTTA AAAAGCAATA CCTGGCTGCC CGGATTTTTT
GTTCAGGACG AGATCAGCCT GGCCGCGAAG CATAAATTTC TTGCGGGCTT CCGTTACGAT
TACAATTCTG TACACGGAAA TATATTTACG CCCAGGCTGG CCTATAAATG GAGCATCAAC
GATAACAATA TCCTGCGTTT AAATGCTGGT ACAGGTTTCA GGGTAGTCAA CATTTTTACG
GAAGACCATG CGGCTTTAAT CGGTGCCCGG GAAGTAAAAG TGGCCCATGA ACTGAAACCT
GAAAAGACCT ATAATGTAAA CCTTAATTTT TTGAAAAAGA TGTATATGGA AAACGGCACT
TTCTTTGGCA TTGAAACCTC GGCTTTTTAT ACCTATTTCA ATAACCGGAT CATTGGTGAT
TTTGACAGCA ATCCCAATGA AATTATTTAT GACAACCTGG ACGGTCATGC GGTAAGCAAA
GGTTTCAGTG CAAATATGGA TCTGAGCCTG AACAATGGGC TAAAGATCAT CTTTGGCGGT
ACCTATCAGG ACGTTGCTAC TTATGAACAT GGGCTTAAAA AGCAACAGAT CCTGACGGAA
AAGTTTTCCG GTAACTGGGC TGTTTCCTAT AAGATTTCTC CGCTTAAGCT GAACGTCGAT
TATACCGGAA ATATTTACAG CCCGGTGCGC CTGCCTTTAT TGAGTGACAC GGATCCAAGA
AAAGAATATT CTCCAACCTG GAGCATTCAG AATATCCAGC TTACTTTTAC TGGTTTCAAA
AAGATGGAGC TGTATGGAGG GGTGAAAAAT CTACTCAACT GGACACCCAA TAGGGGAAAT
CCTTTTATCA TTGCGCGTGC AAATGATCCG TTTGACAAAC ATCCTGAGGT AGACAACCCT
TATCATCTGA CTTTCGATCC TACTTACGTT TATGGGCCCA ATCAAAATAT AAGAGGTTTT
CTGGGTATTA GATTGACAAT TAAATGA
 
Protein sequence
MRIVLTFALF VSYFLSASAQ SGSIGGQVIS EGQPLQAVTL ILQGSTLATK TDSMGNYVFS 
KIAAGTYQVQ ATAIGFRKTL KSVVLKADEY RALNFDLSNF QNDLNEVVVT GTLKEVKRLE
SPVPVEVYTP AFFRKNPTPS IFEALQNVNG VRPQLNCNIC NTGDIHINGL EGPYTMILID
GMPIVSSLSS VYGLSGIPNS LVEQIEIVKG PASSLYGSEA VGGLINIITK KPQNAALFSA
DIFTTSYQEW NADLGFKFKA NKKTDVLTGV NYFKYGHPVD HNHDNFTDVT LQDRISVFQK
WNFKRKYNRI FTLGGRYVYE DRWGGEMQWN KSYRGGDQVY GESIYTNRWE LIGNYQLPAA
EKLFLAFSYN EHNQDSRYGT TSYIAKQKIG FAQLTWDKQL RNHDLLFGAA LRYTYYDDNT
PATTGLNQDL KSNTWLPGFF VQDEISLAAK HKFLAGFRYD YNSVHGNIFT PRLAYKWSIN
DNNILRLNAG TGFRVVNIFT EDHAALIGAR EVKVAHELKP EKTYNVNLNF LKKMYMENGT
FFGIETSAFY TYFNNRIIGD FDSNPNEIIY DNLDGHAVSK GFSANMDLSL NNGLKIIFGG
TYQDVATYEH GLKKQQILTE KFSGNWAVSY KISPLKLNVD YTGNIYSPVR LPLLSDTDPR
KEYSPTWSIQ NIQLTFTGFK KMELYGGVKN LLNWTPNRGN PFIIARANDP FDKHPEVDNP
YHLTFDPTYV YGPNQNIRGF LGIRLTIK