Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0464 |
Symbol | |
ID | 8251551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 550187 |
End bp | 552433 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934114 |
Product | TonB-dependent receptor plug |
Protein accession | YP_003090750 |
Protein GI | 255530378 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTG TCCTTACTTT TGCTCTTTTT GTTAGTTATT TCCTGTCTGC TTCAGCCCAA TCGGGCAGTA TAGGCGGACA GGTCATTTCC GAAGGCCAGC CGCTCCAGGC GGTTACCCTG ATTTTGCAGG GCAGCACTCT GGCTACAAAA ACAGACAGTA TGGGAAATTA TGTTTTTAGC AAAATTGCCG CGGGTACATA TCAAGTTCAG GCCACTGCAA TTGGTTTTAG AAAAACACTT AAATCAGTTG TATTGAAAGC AGATGAGTAC AGGGCACTGA ATTTTGACCT CAGTAATTTT CAAAACGACC TGAATGAAGT AGTGGTTACG GGGACTTTAA AAGAGGTGAA GCGTTTGGAA AGCCCTGTTC CGGTAGAAGT ATATACCCCC GCTTTTTTTA GGAAAAACCC TACACCAAGT ATTTTTGAGG CACTTCAAAA TGTAAACGGT GTAAGGCCGC AATTGAACTG CAACATCTGC AATACCGGGG ACATTCATAT CAATGGCCTG GAGGGCCCTT ACACCATGAT CCTGATTGAT GGGATGCCTA TTGTAAGCAG CTTATCAAGT GTATACGGAC TTTCGGGGAT CCCGAACTCA CTGGTAGAAC AGATAGAGAT TGTTAAAGGG CCTGCATCGT CCTTATACGG AAGCGAGGCG GTAGGGGGCT TAATCAATAT CATTACCAAA AAGCCGCAAA ATGCCGCTTT ATTTTCTGCT GATATTTTTA CTACCAGTTA TCAGGAATGG AATGCCGATC TGGGTTTTAA GTTTAAAGCG AATAAAAAAA CAGATGTGCT GACCGGTGTA AATTACTTTA AATATGGCCA TCCCGTAGAC CATAACCACG ATAACTTTAC CGATGTGACC CTGCAGGACC GCATTTCGGT ATTTCAGAAA TGGAATTTTA AAAGGAAGTA CAACCGGATC TTTACATTGG GTGGCAGGTA TGTGTATGAA GACCGATGGG GTGGCGAGAT GCAATGGAAC AAATCTTACC GGGGTGGGGA TCAGGTGTAT GGGGAAAGCA TTTATACCAA CCGCTGGGAG CTGATCGGAA ATTACCAGTT GCCGGCAGCT GAAAAACTAT TCCTTGCTTT TTCCTATAAT GAGCACAATC AGGATAGCAG GTATGGAACT ACCTCTTATA TTGCCAAACA GAAAATCGGC TTTGCCCAGC TAACCTGGGA CAAGCAATTG CGGAACCACG ACCTGCTGTT TGGCGCTGCA CTGCGCTATA CTTATTACGA CGACAATACG CCGGCTACAA CCGGATTGAA CCAGGACTTA AAAAGCAATA CCTGGCTGCC CGGATTTTTT GTTCAGGACG AGATCAGCCT GGCCGCGAAG CATAAATTTC TTGCGGGCTT CCGTTACGAT TACAATTCTG TACACGGAAA TATATTTACG CCCAGGCTGG CCTATAAATG GAGCATCAAC GATAACAATA TCCTGCGTTT AAATGCTGGT ACAGGTTTCA GGGTAGTCAA CATTTTTACG GAAGACCATG CGGCTTTAAT CGGTGCCCGG GAAGTAAAAG TGGCCCATGA ACTGAAACCT GAAAAGACCT ATAATGTAAA CCTTAATTTT TTGAAAAAGA TGTATATGGA AAACGGCACT TTCTTTGGCA TTGAAACCTC GGCTTTTTAT ACCTATTTCA ATAACCGGAT CATTGGTGAT TTTGACAGCA ATCCCAATGA AATTATTTAT GACAACCTGG ACGGTCATGC GGTAAGCAAA GGTTTCAGTG CAAATATGGA TCTGAGCCTG AACAATGGGC TAAAGATCAT CTTTGGCGGT ACCTATCAGG ACGTTGCTAC TTATGAACAT GGGCTTAAAA AGCAACAGAT CCTGACGGAA AAGTTTTCCG GTAACTGGGC TGTTTCCTAT AAGATTTCTC CGCTTAAGCT GAACGTCGAT TATACCGGAA ATATTTACAG CCCGGTGCGC CTGCCTTTAT TGAGTGACAC GGATCCAAGA AAAGAATATT CTCCAACCTG GAGCATTCAG AATATCCAGC TTACTTTTAC TGGTTTCAAA AAGATGGAGC TGTATGGAGG GGTGAAAAAT CTACTCAACT GGACACCCAA TAGGGGAAAT CCTTTTATCA TTGCGCGTGC AAATGATCCG TTTGACAAAC ATCCTGAGGT AGACAACCCT TATCATCTGA CTTTCGATCC TACTTACGTT TATGGGCCCA ATCAAAATAT AAGAGGTTTT CTGGGTATTA GATTGACAAT TAAATGA
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Protein sequence | MRIVLTFALF VSYFLSASAQ SGSIGGQVIS EGQPLQAVTL ILQGSTLATK TDSMGNYVFS KIAAGTYQVQ ATAIGFRKTL KSVVLKADEY RALNFDLSNF QNDLNEVVVT GTLKEVKRLE SPVPVEVYTP AFFRKNPTPS IFEALQNVNG VRPQLNCNIC NTGDIHINGL EGPYTMILID GMPIVSSLSS VYGLSGIPNS LVEQIEIVKG PASSLYGSEA VGGLINIITK KPQNAALFSA DIFTTSYQEW NADLGFKFKA NKKTDVLTGV NYFKYGHPVD HNHDNFTDVT LQDRISVFQK WNFKRKYNRI FTLGGRYVYE DRWGGEMQWN KSYRGGDQVY GESIYTNRWE LIGNYQLPAA EKLFLAFSYN EHNQDSRYGT TSYIAKQKIG FAQLTWDKQL RNHDLLFGAA LRYTYYDDNT PATTGLNQDL KSNTWLPGFF VQDEISLAAK HKFLAGFRYD YNSVHGNIFT PRLAYKWSIN DNNILRLNAG TGFRVVNIFT EDHAALIGAR EVKVAHELKP EKTYNVNLNF LKKMYMENGT FFGIETSAFY TYFNNRIIGD FDSNPNEIIY DNLDGHAVSK GFSANMDLSL NNGLKIIFGG TYQDVATYEH GLKKQQILTE KFSGNWAVSY KISPLKLNVD YTGNIYSPVR LPLLSDTDPR KEYSPTWSIQ NIQLTFTGFK KMELYGGVKN LLNWTPNRGN PFIIARANDP FDKHPEVDNP YHLTFDPTYV YGPNQNIRGF LGIRLTIK
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