Gene Phep_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0461 
Symbol 
ID8251548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp547123 
End bp548067 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content45% 
IMG OID644934111 
Productputative SAM-dependent methyltransferase 
Protein accessionYP_003090747 
Protein GI255530375 
COG category[R] General function prediction only 
COG ID[COG3129] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG AAAAAACCAT CCTGCATCCA AGAAATAAAC ACCGTTCAAG ATATAATTTC 
CCTGAACTGA TCAAAACCTT ACCGGAGTTG TATCCATTTG TTGCTGTCAA TTCCTATGGC
GGCGAATCTA TCGATTTTTC TGATCCGGTA GCGGTTAAGC TATTGAATAA AGCGCTGTTA
AAACATTTTT ATGGAATTGA CAACTGGGAT ATTCCAGCAA ATTATCTGTG TCCGCCTATT
CCGGGCAGGG CAGATTATGT GCATTACCTG GCAGATCTGC TTGCCCGGAA TAATAAGGGA
ATTGTGCCAA AAGGCAACCG TGTAAAAGGC CTGGATATCG GCATTGGTGC AAATTGTATT
TATCCGATTA TTGGACTGCG GGAATACGGA TGGAGTTTTG TAGGTTCGGA TACAGACCAG
GGAGCCATTA AGACGGCTAA AGCTATTGTT GCGGCGAATT CTTTGCTGAC CGGTGCTGTA
AGTTGCAGAC TGCAGCCTAA CCCAAAAGAT ATTTTTAAGG GTATTGTAAA GCCGGGAGAG
CTATTCGACT TTACGATGTG CAATCCACCT TTTCATGCTT CGGCAGCTGA AGCGCAATCA
GGGACCAAAA GAAAACTGCA AAATCTGGGC AAACATACAG GAAAAGAAAC GGTGCTGAAT
TTTGGGGGCC AGCAGGCTGA ATTGTGGTAT GATGGTGGAG AACTCGCCTT CATCAGAAAT
ATGATCAATG ACAGCATGGC TATTGCCAAT CAGTGCCTTT GGTTTAGCAG CCTGGTTTCA
AAAAGCAGTA ACCTGTCTTT TATCTATAAA GCGCTTCAGG GTGCCGGGGC TTTGCAGGTA
AAAACAATAG AGATGGCACA GGGCCAAAAG ATCAGCCGTT TTGTGGCCTG GAGCTTTTTA
ACTGAAGCCG CACAGCAGCA GTGGATGGGA ACAAGGTGGC GCTAG
 
Protein sequence
MSEEKTILHP RNKHRSRYNF PELIKTLPEL YPFVAVNSYG GESIDFSDPV AVKLLNKALL 
KHFYGIDNWD IPANYLCPPI PGRADYVHYL ADLLARNNKG IVPKGNRVKG LDIGIGANCI
YPIIGLREYG WSFVGSDTDQ GAIKTAKAIV AANSLLTGAV SCRLQPNPKD IFKGIVKPGE
LFDFTMCNPP FHASAAEAQS GTKRKLQNLG KHTGKETVLN FGGQQAELWY DGGELAFIRN
MINDSMAIAN QCLWFSSLVS KSSNLSFIYK ALQGAGALQV KTIEMAQGQK ISRFVAWSFL
TEAAQQQWMG TRWR