Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0457 |
Symbol | |
ID | 8251542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 543249 |
End bp | 544649 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644934105 |
Product | hypothetical protein |
Protein accession | YP_003090743 |
Protein GI | 255530371 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.38501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATGG AAAATAGAAC GATGATTACG GAGCCGGCCA GAGATTTGCC GGTACGCCTG GACGTTGATG TATTGGTGGT TGGTGGGGGC CCTTCAGGAA TCATTGCAGC CCAGGCTGCT GCTGAAGATG GGTTAAAGGT TACCCTGATC GATAGCCGGA GTTTTGTAGG GGGTAACATG ACGATAGGTT TGCCGGTACT CGGTTTTCTG GGACAAAAAG GAAACCAGAT CATCAAAGGC ATTCCGCAGA AGTTTATAGC GCGCCTGAAA GAAAAAAATG CGGCCAGTGA ACACAGGCCT TGTCCGCTGC ACATGAGCCT GACCCTGGTG GAACCTGAAG CAGTAAAAAA TGTGGGCCTG GAGATGCTGG TGGATAGTGG GGTGAATGTT TTGCTGTATG TATTTTTTGC GGGTGTGGTT ATGGAAGGTA ACGCAATTAA AGGGGTAATT ATCGAAAGTA AATCGGGCAG GGAAGTTATC CTGGCCAAAA CTATAATTGA TTGTACTGGC GATGCCGATG TAGCCTTTAA AGCAGGGGTG CCCTGTGAGC AGGGCAATGA ACATGGCGGT GCACAGCCTC CAACTTTAAT GTTCTGTATG GCTGGCGTGG ATACTGAAAA GTTGCGGATG TCTATTGCCC AGGAGCCCCG TACCTATTTA ACCGATTTTA TCCCTGCTGA ATATTTCGGA CAAAATAACC AGTTTATTGT AGTGGGCTTA CGGAGTGTGA TGGAAAAGGC CCGGGAAGCT GGGTATCATT TGCCGGTTGA GCGTACGATT TTGATCACCG GTTTGCGTGA GGGCGAAATA TGGGTCAATA TGTCCAGAAT TAACGGTGTG GATGGTACCA ATCCGGAGAG TTTAACCTAT GGGGAAATTG AAGGGCGTAA ACAGGTAGAG GAGATCCAGC GTTACCTGAA TGAGTATGTA CCCGGTTTTG AGCGGGCAGT GTTCACCAAG ATGGCCCCGT TTTTGGGGAT CAGGGAAACC CGTCGCATTG TGGGGCAGTA TGTGTTGACT GCTGATGATA TTCTGGCTTG CCGGCGCTTT GATGATGCCG TTGCGGTGGC CAGCTATCCT TTGGACATCC ACCATCCTGA AGGCGGTGGC TGTACCCTCA CCTGGTGCGG GGATTGTTAC GACATCCCTT ACCGTTCACT GATCCCGGAA AAGATAGAGA ATCTGATTGT GGCAGGCAGG TGCATTTCTA CTACCCACGA GGCCATGTCG GCCATCCGGG TAATGGCACC TTGTATGGCG ATGGGTGAAG CTGCCGGAAG GGCTGCAAAA ATGAGCATCA GAAAAGGCGT TTTACCTGCT CAGTTGAATG TGGCGGAATT GCAGGCTGAA TTGCTGGAAA AGGGCGCTTA CCTGAATCCA AAACAGCTGG TCACTTCATA A
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Protein sequence | MEMENRTMIT EPARDLPVRL DVDVLVVGGG PSGIIAAQAA AEDGLKVTLI DSRSFVGGNM TIGLPVLGFL GQKGNQIIKG IPQKFIARLK EKNAASEHRP CPLHMSLTLV EPEAVKNVGL EMLVDSGVNV LLYVFFAGVV MEGNAIKGVI IESKSGREVI LAKTIIDCTG DADVAFKAGV PCEQGNEHGG AQPPTLMFCM AGVDTEKLRM SIAQEPRTYL TDFIPAEYFG QNNQFIVVGL RSVMEKAREA GYHLPVERTI LITGLREGEI WVNMSRINGV DGTNPESLTY GEIEGRKQVE EIQRYLNEYV PGFERAVFTK MAPFLGIRET RRIVGQYVLT ADDILACRRF DDAVAVASYP LDIHHPEGGG CTLTWCGDCY DIPYRSLIPE KIENLIVAGR CISTTHEAMS AIRVMAPCMA MGEAAGRAAK MSIRKGVLPA QLNVAELQAE LLEKGAYLNP KQLVTS
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