Gene Phep_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0457 
Symbol 
ID8251542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp543249 
End bp544649 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content50% 
IMG OID644934105 
Producthypothetical protein 
Protein accessionYP_003090743 
Protein GI255530371 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.38501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGG AAAATAGAAC GATGATTACG GAGCCGGCCA GAGATTTGCC GGTACGCCTG 
GACGTTGATG TATTGGTGGT TGGTGGGGGC CCTTCAGGAA TCATTGCAGC CCAGGCTGCT
GCTGAAGATG GGTTAAAGGT TACCCTGATC GATAGCCGGA GTTTTGTAGG GGGTAACATG
ACGATAGGTT TGCCGGTACT CGGTTTTCTG GGACAAAAAG GAAACCAGAT CATCAAAGGC
ATTCCGCAGA AGTTTATAGC GCGCCTGAAA GAAAAAAATG CGGCCAGTGA ACACAGGCCT
TGTCCGCTGC ACATGAGCCT GACCCTGGTG GAACCTGAAG CAGTAAAAAA TGTGGGCCTG
GAGATGCTGG TGGATAGTGG GGTGAATGTT TTGCTGTATG TATTTTTTGC GGGTGTGGTT
ATGGAAGGTA ACGCAATTAA AGGGGTAATT ATCGAAAGTA AATCGGGCAG GGAAGTTATC
CTGGCCAAAA CTATAATTGA TTGTACTGGC GATGCCGATG TAGCCTTTAA AGCAGGGGTG
CCCTGTGAGC AGGGCAATGA ACATGGCGGT GCACAGCCTC CAACTTTAAT GTTCTGTATG
GCTGGCGTGG ATACTGAAAA GTTGCGGATG TCTATTGCCC AGGAGCCCCG TACCTATTTA
ACCGATTTTA TCCCTGCTGA ATATTTCGGA CAAAATAACC AGTTTATTGT AGTGGGCTTA
CGGAGTGTGA TGGAAAAGGC CCGGGAAGCT GGGTATCATT TGCCGGTTGA GCGTACGATT
TTGATCACCG GTTTGCGTGA GGGCGAAATA TGGGTCAATA TGTCCAGAAT TAACGGTGTG
GATGGTACCA ATCCGGAGAG TTTAACCTAT GGGGAAATTG AAGGGCGTAA ACAGGTAGAG
GAGATCCAGC GTTACCTGAA TGAGTATGTA CCCGGTTTTG AGCGGGCAGT GTTCACCAAG
ATGGCCCCGT TTTTGGGGAT CAGGGAAACC CGTCGCATTG TGGGGCAGTA TGTGTTGACT
GCTGATGATA TTCTGGCTTG CCGGCGCTTT GATGATGCCG TTGCGGTGGC CAGCTATCCT
TTGGACATCC ACCATCCTGA AGGCGGTGGC TGTACCCTCA CCTGGTGCGG GGATTGTTAC
GACATCCCTT ACCGTTCACT GATCCCGGAA AAGATAGAGA ATCTGATTGT GGCAGGCAGG
TGCATTTCTA CTACCCACGA GGCCATGTCG GCCATCCGGG TAATGGCACC TTGTATGGCG
ATGGGTGAAG CTGCCGGAAG GGCTGCAAAA ATGAGCATCA GAAAAGGCGT TTTACCTGCT
CAGTTGAATG TGGCGGAATT GCAGGCTGAA TTGCTGGAAA AGGGCGCTTA CCTGAATCCA
AAACAGCTGG TCACTTCATA A
 
Protein sequence
MEMENRTMIT EPARDLPVRL DVDVLVVGGG PSGIIAAQAA AEDGLKVTLI DSRSFVGGNM 
TIGLPVLGFL GQKGNQIIKG IPQKFIARLK EKNAASEHRP CPLHMSLTLV EPEAVKNVGL
EMLVDSGVNV LLYVFFAGVV MEGNAIKGVI IESKSGREVI LAKTIIDCTG DADVAFKAGV
PCEQGNEHGG AQPPTLMFCM AGVDTEKLRM SIAQEPRTYL TDFIPAEYFG QNNQFIVVGL
RSVMEKAREA GYHLPVERTI LITGLREGEI WVNMSRINGV DGTNPESLTY GEIEGRKQVE
EIQRYLNEYV PGFERAVFTK MAPFLGIRET RRIVGQYVLT ADDILACRRF DDAVAVASYP
LDIHHPEGGG CTLTWCGDCY DIPYRSLIPE KIENLIVAGR CISTTHEAMS AIRVMAPCMA
MGEAAGRAAK MSIRKGVLPA QLNVAELQAE LLEKGAYLNP KQLVTS