| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0451 |
|---|
| Symbol | |
|---|
| ID | 8251536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 535027 |
|---|
| End bp | 536310 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644934099 |
|---|
| Product | L-sorbosone dehydrogenase |
|---|
| Protein accession | YP_003090737 |
|---|
| Protein GI | 255530365 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TACTCATTAT ACCCGTTTTA CTTAGTGCCC TCATTTTTTT TACCCTTTAT
GCCTTTAAAG ACATTTCTGC ACTGAGGGGG CCTAAACCTG ACGCCGACAA TGTAGGCTTA
AAACTACCGG AAGGGTTCGG CGCTTTAAAA GTTGCCGATA TAGGCGCCAA AGCAAGGCAC
CTGGTGGTTA CCCCGCAAGG CACTATTTAT GTGAAACTTG CCAGGGTAAA AGATGAAAAA
GGGATCATCG TACTTAAAGA AAACAGTGAA GGCAGGGCCG AAATTACCGG TGGATTTGGC
AATTATGGCG GCACCGGCAT TTACATGAAA GATGGCTACC TTTACGCCTC TTCAAACAAA
GAAGTATTCA GGTACAAGCT GAACGACAAA AATGAAGTCA TCGATCCAAA CAAACCTGAA
ATGATTGTTA AGGGCTTAAA AATGGGCCGC CAGCACGAAA CCAAATCACT GGTACTGGAC
AATGACGGGA ACATCTATGT GAACATCGGT GTGCCTTCAA ACTCATGTCA GGAACAAGAC
CGGGGCCTCA GATCTAAAGG CATTCCAGGC TGCCCGCTGT TAGACTCTGC AGCAGGCATC
TGGCAGTTTA AAGCCAGTAA ACTGAACCAG AGCTATGCCG AAGGTGTACG TTATGCCACA
GGCCTCAGAA ATGTAGTAGG CCTGGACTGG AACCAGCAAA ACAACCAGCT TTTTGTAATG
CAGCATGGCC GCGATAACCT GAACAGCTCA TGGCCGGAAC TTTATGATAC CAAAGAATCG
GCAGAACTGC CTGCAGAATG CCTGTATGCC CTAAAAAAAG GCGACAATGC CGGCTGGCCC
TTTATGTATT ACGATGGCAT ACAACATAAA AAAATTGTTG CGCCTGAATA CGGGGGTGAC
AAGAAAAAAG AAGCAGATCC AAAATATTTA GAACCTGCCA GGGCCTACCC GGCGCACATG
GCACCTAATG GTTTATTGTT TTATACCGGC AACATGTTCC CGGCAAAATA TAAAAACGGG
GCCTTTATTG CTTTCCATGG TTCATGGAAC CGTGCACCAG AACCTCAAAA AGGTTTCTTT
GTGGTTTTCC AACCATTTAA AGATGGTAAA CCGTCGGGCG ACTGGGAAAT ATTTGCAGAC
AATTTTGCGG GTACGCCGGA GAAAGCGGCA ATGAATAAAG CCGACCATCG CCCATGCGGA
CTGGCTCAGG GTGCCGACGG CTCACTTTAT GTAACAGATG ATTCCAAAGG AGTGATCTAT
CGCATCCTAT ACAACAAGAA ATAA
|
|---|
| Protein sequence | MKKILIIPVL LSALIFFTLY AFKDISALRG PKPDADNVGL KLPEGFGALK VADIGAKARH
LVVTPQGTIY VKLARVKDEK GIIVLKENSE GRAEITGGFG NYGGTGIYMK DGYLYASSNK
EVFRYKLNDK NEVIDPNKPE MIVKGLKMGR QHETKSLVLD NDGNIYVNIG VPSNSCQEQD
RGLRSKGIPG CPLLDSAAGI WQFKASKLNQ SYAEGVRYAT GLRNVVGLDW NQQNNQLFVM
QHGRDNLNSS WPELYDTKES AELPAECLYA LKKGDNAGWP FMYYDGIQHK KIVAPEYGGD
KKKEADPKYL EPARAYPAHM APNGLLFYTG NMFPAKYKNG AFIAFHGSWN RAPEPQKGFF
VVFQPFKDGK PSGDWEIFAD NFAGTPEKAA MNKADHRPCG LAQGADGSLY VTDDSKGVIY
RILYNKK
|
|---|
| |