| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0446 |
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| Symbol | |
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| ID | 8251531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 529818 |
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| End bp | 531410 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934094 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003090732 |
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| Protein GI | 255530360 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA TTAGATTCAC AATATTATTA TTCGGGGGAT TATTGATCCT GCTAACTGCT
ACAAGGTGTA AAAAGTTCCT GGAGGCTGAT CCGATCTCGA CCATCACGCC CGGAAGCTTC
TGGAAAGATA AGGCAGATGC TGATGCCTGG ATGGCGGGTA TATACAACGC TGTGCAAACT
ACATTGAATA CCAATTGGTT TGACTGGGGC GAAGTTCGTG CCGATAATGT TAAAGGTGCG
GGCACGGGAA CTGCACAAAC CAAATTTTTA AATAATGCCT TATCGGCAAG TGATCCGGAT
ATTGTGGGCT CAAATGGCAC AACCGGCGCG GCCAGTTGGG CAAGCCTTTA TACCACCATT
TCGCTTTGCA ACTATGGCAT TAAATACTAT CCGCAAATGA CCAGCGAGAA TATTGGTGGG
GCTACGGCAA CTTATACCGA TTATCTGGGC CAGTGTTATG GGCTACGCGC TTTGATGTAT
TTCTATGGCC TCAGGGTATG GGGTAAAATG CCGCTGATTA CTGAGCCGCT GGAAACCTAT
GGCCAGCCAA CCCAGTTTCC CAGATCGCCT ATAGCTGACG TGAAGAAAAG AATCCTGGAT
GATATCGATC TGGCATTGAA AAGTATAGGT ACCAATAAAA CAAATAAATA TAACATGCAG
AAAGCTGCGG TTTATGCTTT GCAGACTGAT GTATACATGT GGTTTCAACA GTATGACCTT
GCCCTGGTGG CTTCGCAAAA TACAATTACT GAAAGTGGTT GTACCTGGGT TACCAATGCG
CAGAGCTGGA AGAATATGTT TACTGATCCT TCAACTTCAA CAGAAACCAT TTTTAACCTG
TACTGGGATA ATATTGAACG TGGTGGTGGT GTAGGGGTAT GTGGAAGACT TGCTTCTGGT
TCCAATACCA ATAATTACAT GATTACGCCC CGGATTTTTC AGGAATTGTT TGACAGAACT
GATCCGGCAA CTTCATTACC CTCTGACGGC CGTTTAACCA CAAGTTTCGA CATGATCAGT
TATAAAACCC CGGTCGAATA TAATGCATTG AACGGTGCGT TTGGTAAATT TACCTTATAT
GATCCGGCTG CAAAAAGAAG TGATGGCCAG CCTGGTGGTG CATTTGTATA TCAGGCCAAT
GGCGAATGTA ATGTGAAACT GCCCATCTAT CGTTTTGCTG ATATCATGTT GTTAAGGGCC
GAGGCCCTGG CCCATACAGG GAAATACCAG GACGCCCTGG ATATTGTTAA TACTGTGAGA
GGCCGGGTAG GATATAAAAC CCAGGCTAAG TTGACCGATT ATACGGGGGA TATTGTAACC
GGTATTGAGC GTACCATTCT TACTGAGCGC CAGTACGAGC TGTTGGGCGA AGGTAAAAGA
TGGTTTGACT TATGCCGTAT TGGAAAAATG TATGATTTTA CCAATGGCTA TACTTACTTA
ACCGGTATCA TGAACCCAAT TTTGGCCGGA AGATCAGGTG CAACCAAATA CGAAGGAACA
AATATCGGAA GAATCATGTT CCCGATTGCC TCGGCAGCAT TTAATGCTAA CCGTCAATTG
GTGGGCGACC AAAATCCCCC TTATGATGAG TAA
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| Protein sequence | MKQIRFTILL FGGLLILLTA TRCKKFLEAD PISTITPGSF WKDKADADAW MAGIYNAVQT
TLNTNWFDWG EVRADNVKGA GTGTAQTKFL NNALSASDPD IVGSNGTTGA ASWASLYTTI
SLCNYGIKYY PQMTSENIGG ATATYTDYLG QCYGLRALMY FYGLRVWGKM PLITEPLETY
GQPTQFPRSP IADVKKRILD DIDLALKSIG TNKTNKYNMQ KAAVYALQTD VYMWFQQYDL
ALVASQNTIT ESGCTWVTNA QSWKNMFTDP STSTETIFNL YWDNIERGGG VGVCGRLASG
SNTNNYMITP RIFQELFDRT DPATSLPSDG RLTTSFDMIS YKTPVEYNAL NGAFGKFTLY
DPAAKRSDGQ PGGAFVYQAN GECNVKLPIY RFADIMLLRA EALAHTGKYQ DALDIVNTVR
GRVGYKTQAK LTDYTGDIVT GIERTILTER QYELLGEGKR WFDLCRIGKM YDFTNGYTYL
TGIMNPILAG RSGATKYEGT NIGRIMFPIA SAAFNANRQL VGDQNPPYDE
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