Gene Phep_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0442 
Symbol 
ID8251527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp523581 
End bp524753 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content46% 
IMG OID644934090 
ProductFecR protein 
Protein accessionYP_003090728 
Protein GI255530356 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC AAAACAACAT TAAGCAAACT GCTGAACTCA TCATTAAGTT CCTTAAGAAC 
GAATTAAGCC CTCAGGAAAA GAAAGATTTT GAGCTTTGGC TCAACGCATC GGCCGATAAC
CGGGCATTGG TAGAATCTTT CCGGAATACA GAAACCGTAC AACACGAGCT CAATTATATA
GCTGCTGTCG ACATCAACAA AGGCTGGGAA GAAGTTTCAA AGCAAATTCA GGTTAAGCCT
GCAAAAACCT TCTCCTGGAA TAAGCTCACA AAATACAGCG CCGCCGCCGT ATTGGTAGTG
GCGCTGGGCT TTGGGCTTTA CAATTACCTT TCGACAGCTA AAACCCGGCA GTTTAATCAA
AGCGCAGCTG TGCACGACAT TATGCCGGGA ACCCAGAGAG CAACACTGAG GATGGCGGAC
CGTTCCAGAA TGGATCTGGG CACTTCTTCG TTCTGGCTGG TAGGTGATAA TGGAAGAATA
GCTTTAGGGG CAAAAAAAGG CGTGCTGTAT TTTGGGAAAA AAGGGAAAAG GAATAACATT
GCGGGCAATA ATGTATTAGA GACCCCCCGG GCCGGAGAAT ACAGGATGGT ATTGCCCGAC
GGAACAAAGG TTTGGCTAAA CGCGGTATCT ACACTGAGCT TCCCAACCAG CTTTAATCAA
ACGGAGCGGC GTGTTGAGCT TACCGGAGAA GCTTATTTCG AAGTTGCACA CAATAAGGCC
ATGCCTTTCA AAGTCGCCTT TAACCAAACG GAAGTAGAGG TACTCGGAAC TCATTTTAAC
ATCAACAGCT ATGGAAAAAC AAGTAAGACC ACACTGGTTG AAGGCTCCAT TAAAGTAACA
GAAAATGGCC GTCAGCAGCT ATTAAGGCCA GGCGAGGAAG CCGTAATCGA CAACGGCGCT
GTTAACATTC ACAAGACCGA CACCTACAAA TCAATTGCCT GGAAAGAGGG CACTTTCTAT
TTTAAAGAAG ATTCAATGAC TGACATCATG GACCAGCTGT TCAGGTGGTA TGATGTAGAG
ATCGTTTATA AGGGGAAACC TGATACAAAA AGATATAGCG GGAACATCCG CAGGCAGGCT
ACTTTAAACC AGGTACTGGA AATGCTGAAT GCGGTAAGCG GCGCCAGGTT TAGTCTGGAA
AACCGCAAAG TAACTGTAGA TTTTAACAAT TGA
 
Protein sequence
METQNNIKQT AELIIKFLKN ELSPQEKKDF ELWLNASADN RALVESFRNT ETVQHELNYI 
AAVDINKGWE EVSKQIQVKP AKTFSWNKLT KYSAAAVLVV ALGFGLYNYL STAKTRQFNQ
SAAVHDIMPG TQRATLRMAD RSRMDLGTSS FWLVGDNGRI ALGAKKGVLY FGKKGKRNNI
AGNNVLETPR AGEYRMVLPD GTKVWLNAVS TLSFPTSFNQ TERRVELTGE AYFEVAHNKA
MPFKVAFNQT EVEVLGTHFN INSYGKTSKT TLVEGSIKVT ENGRQQLLRP GEEAVIDNGA
VNIHKTDTYK SIAWKEGTFY FKEDSMTDIM DQLFRWYDVE IVYKGKPDTK RYSGNIRRQA
TLNQVLEMLN AVSGARFSLE NRKVTVDFNN