Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0437 |
Symbol | |
ID | 8251522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 513617 |
End bp | 515374 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934085 |
Product | hypothetical protein |
Protein accession | YP_003090723 |
Protein GI | 255530351 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.516029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACA TTAAAAATAT CACAACCCTG CTCCTGCTTA TTGTAGCAGG TATACATGCA GGTTGTAAAA AAGATCCTGT GATGTATGGC AAGGGCATTG AGTCCTTCAA ATTCGTTGTT AAGGATGCAC AAGGTGCAGA TAAAGAATAC CCAGGCGTCA TCACCGGTGA TGAAATCGTT GTTTCACTCC CTATAGAAGT TGATGTGACC AACCTGAAAG CCAGCTTTGT AGTGGATAAT CCGAGAACTA TTGTACAGGT TGGTGCTGAG GTGCAGGAGT CGGGTATTTC TGAAATGGAC TTTACAAATG CGATTTCGTA TAGTGTAAAG GCTGAAGACA AAAGCAGGAG GAGTTATACG GTAAGGGTAG AAAAAAAGAT CGCCCTTCAA TCGTTTGGCT TTTTTAAGGA GGATAACCCG GGCGTACTTG AAGGAGATTA CAAGGCCGTA ATAAGAGGCC TGACGATTGA CATTGATATT CCTGAATCTG TTGACCTGAC AAAGCTGGTT GCAAGATTTC AAACTACAGC TGGCGCTACC TTAAAGATCG GTGCCGTAGC ACAGGAGAGC CAGAAAACAG TAAACAATTT TAGCAGTAAT TTAATCTACA CATTTAATGC AGCAGGTTTA GCCACAGCAT TGGATTTTAC TGCGAAAATC TCATTTATAG GGGCACAATG GTGGATGATT GGCGATAAGA GTATTATAGG TAGTGAAGCC ACTGACGTAA AAATGGCCAT CCACCCTTTT ACCAAACAGC CTTACCTGGC CTATATCAGA ACGGGTAAAA ACGAAAGCGG TGCTGTTATT CCGGCCACTG AGAAAAAAAT TGCAGTCATT GCCCTCAATG GAACCATATG GAAAAACATT GGCAGTGCAA TGGGGATTTC TAACGAACAG GTAGATATTA TTAACATTGC TTTCGATGAA GAGGGAGCGC CTTATGTAGG CTATAAAGAT TATTTAGATG GGCTGCAGAA AGCAACCGTA TTGAAATATA CCAATGACAG CTGGACTGCA GTAGGGGCTA AAAATTTCAG TCCGATGCGG GTAGATAAAT TTTCATTTAC TGTAGGTGAA AACAATCAGC CATTAATAGG TGCTTCTACC TTTACCGCCA TTACGGGCTA TTTAAAACGT GCCATATACG CAAGCAATTA TACCAATAAC AATTGGAATG ACATTACCCC TGCAATCGCA AACAACCTGA TTGGTGCTGT ACAGGTATTC AGAGGGCTGG ACGGAAAAGG TTACATGGCT GTGCTGGACA GGAACTCTAA TTTCAGTATG TATAAATTAA CTAACAATAC CTGGGCGCCG GTTGGGCCTG TAGGCTTCAG AACTTCTGAC GGTTTGCCGG GATATACTTC TGTAATTGGT GCGGCATCGG CCGATGGTAC CGTTTATATT GGTTTCCAGA CCGTATCAGC CAACCAGCGC TTAAACCGGA TCATGAAGTT TAATGGTACC ACCTGGGAAG AACTTGGTTC GGCCGGAAAC AGCCAGGACC AGAACGAGAA GTATGCATTG GCAATAGACC CTGATGGTAA ATTATATTTC GGCTTTGCCA ATACGACCGG ACTATATGTG CGCACTTTTA ACGACCATAC TAAAAACTGG AATACACCAA GGTTAGTATT TTCAGGGAAG ATCAACACAT TTGACCTTCA GGTTGCCCCG GATGGCATTC CTTATCTTGC TGTAAGTCCG AGCAGCGACA ATAAAGTAAT TGTTTATAAA TATTCGGCAA CGAAATAA
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Protein sequence | MKNIKNITTL LLLIVAGIHA GCKKDPVMYG KGIESFKFVV KDAQGADKEY PGVITGDEIV VSLPIEVDVT NLKASFVVDN PRTIVQVGAE VQESGISEMD FTNAISYSVK AEDKSRRSYT VRVEKKIALQ SFGFFKEDNP GVLEGDYKAV IRGLTIDIDI PESVDLTKLV ARFQTTAGAT LKIGAVAQES QKTVNNFSSN LIYTFNAAGL ATALDFTAKI SFIGAQWWMI GDKSIIGSEA TDVKMAIHPF TKQPYLAYIR TGKNESGAVI PATEKKIAVI ALNGTIWKNI GSAMGISNEQ VDIINIAFDE EGAPYVGYKD YLDGLQKATV LKYTNDSWTA VGAKNFSPMR VDKFSFTVGE NNQPLIGAST FTAITGYLKR AIYASNYTNN NWNDITPAIA NNLIGAVQVF RGLDGKGYMA VLDRNSNFSM YKLTNNTWAP VGPVGFRTSD GLPGYTSVIG AASADGTVYI GFQTVSANQR LNRIMKFNGT TWEELGSAGN SQDQNEKYAL AIDPDGKLYF GFANTTGLYV RTFNDHTKNW NTPRLVFSGK INTFDLQVAP DGIPYLAVSP SSDNKVIVYK YSATK
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