| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0433 |
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| Symbol | |
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| ID | 8251518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 504628 |
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| End bp | 508020 |
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| Gene Length | 3393 bp |
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| Protein Length | 1130 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934081 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003090719 |
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| Protein GI | 255530347 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.735104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGTGG AGAAAGTGGT TTATACCCCG GCACACGATT ATATTTTAGC AGATTTTAAC
CTGTCGGCAC TAAACCTGTC GGATATTTTA AAGCACAATA AGGTTGGGGC AGATACCAGT
GCCAAGGGTT TTTATGAACT TGTACCGGCA GAGATCAGCC TGAATTTTGC AGTTTTTGGA
GATGCCGGGG GCGAGATGAA CAATCCGCTT GTAACGGTCA CACAAACACC CGACCGGGTA
TTGCTGTCCT GTTCCTGCCC CTCTGCTGCC GATGGCTTAT GTGAATTCCA GGCCCGGGCC
TTGTACAACA TTATGGAGCG ACAGCCATTG CGCCTTTTTT TTGATGCACC GCTAAGACAT
AAAAAATTAA AAGAGTTTGC GCAGGATTAC GGGCTGGAGC AGGAAAAGAA TCCGGATGAT
CATTTTGAGC TCAGCTATAT AAAAGGTAGT CTCGGGATCA GCCCCAAAGT CAAAACCCTG
TTTCCGGTTA CCCAAAAAAC AAAAGCGGAA CTCGCAGCGT CCCTGCTCCC AAAAAAAGAA
TTTAACCTGC CGGTATCCGG TGGCCTCATC AAAAAGGAAA TGCAGACGAT TGTGGTGTTT
AGCCAGCACC GTTATTACAG TCACCTTAAC ATCTCACTCT ATGAAGGCCA GGCCAGTCGC
GATGGCAAAA TAAAGAACCC CTTAAAAGCC ATTGATCCTT CCGATCTGCT TTGGACTACC
GAGAACATCA GTGAGCTTAA ATTTCTAAAC GGTGTCCTTA AATTTCAGAA TAACTACAAT
GCTGAAGCTT CCGGGTCCGA CCTCGAAGGT TTAAGGGCAC TGGCCAGAAA CCCACTGGGA
CTCGACATCT ACCTGCACGA TCCTAAAATT TCGCCCAACA TATCCGCCAC TTCCATCAGC
AGGATAAAAC TTAAAATATT AGGGATAGAC CTGGTCCTGT CGGTCAATGA AAAGGGCGAT
TTCTATGAAG TGTCGGGTAA GCTGATGCTT GATGATCAGG CTATACCTCT TGAAAACCTG
AGCATCAAAC ATCATTATTT TATCCAGCTC GATAAAACCC TGCACCTGAT CGATAAGCCC
GATTTTTTAA GGGTGATCGA ATTTTTCAAA AAGCATTACG ATAAAATGCT GATCCACAGG
TCTAAGTTTG ATGATTTTTA TGAAAACATC CTTTCTAACC TGGAAGAAAA GGTTCGCATC
AATTATGCTT ACCTGAAGCC GGCTACCAAA AAACAGATAG AAGACAAAGG CTATGACCTG
GAAAACGAAC AGCTGATCTA TCTGTCAGAG TCGGAAGATT TTGTGCTCAT CACCCCCGTA
ATGCGTTATA GCAATACCGA AATCCCGGTG CTTTCGCGTA AGCAGATCAT CGCAAAGGAT
AAATACGGCC ATACTTTCAG CCTGCGGAGG GATGAAGCCG CAGAATTGCA GTTTATTGCC
GACATTGCAA AGCAACATCC TTTTTTTGAA GAACAACAGG ATGAAGACCT GCGGTTAGAT
TGTTTTTACA TGCACCGCAA GCATTTTTTG GATATAGAGT GGTTTTTAAA TGCCTTTGAA
GCCTGGCGCA GCAAAGGGAT AACCATTCTG GGTTTTAATC AGCTAAAAAA CAATAACCTG
AGCCAGTACA AGGCCAACAT CTCCATCAAG GTGATCAGCG GGGTCGACTG GTTCGAGACC
AAAGCAAAAG TAGAATATAA CGACCAGGCC ATTTCTTTAA AGCACCTGCA CAAATCTATC
CGCAACAAGA GCAAGTTTGT AAAGCTGGAT GATGGCACAA TGGGTATTTT ACCGGATGAA
TGGATAGAAA AATTTACCAG CTATTTTAAC GCAGGAGAGC TTGTTGAAGA AAGCATCCAT
ACCCATAAGA TCAATTACAA TAAGATTGCC GAGCTGTATG ACGAGCAGCT CTTTGACGAA
TCGGTAAAAG ACCAGCTGGC CTTATACCGG GCCAAACTTT CCGGCCCGGA AAGCATCCTG
CCTGTTCCTG TGCCGGAAGG ACTGAATGCA GAATTGCGGG GCTATCAGCA GGACGGCCTA
AACTGGCTTA ACTTTTTAGA TGGCTTTAAC TTTGGTGCTT GTCTGGCTGA TGATATGGGC
CTCGGAAAAA CCATACAGAT CATCGCATTT ATATTGAGCC AGCGCAATAA GGGCCATCAG
AATACCAATC TTGTGGTGGT ACCGGCCTCT TTAATTTTTA ACTGGCAGGC CGAGGTGGCC
AAATTTGCAC CTTCGTTAAA AATCCATACC GTTTATGGTG CCGACCGGCT AAAGGATATC
CATCAGTTTG ATCAGTATGA AATTGTGCTT ACCTCTTATG GGACACTACT GGCTGATATC
CGTTTTTTAA AGTCCTACTA CTTTAATTAC ATATTTTTAG ATGAGTCGCA GACGATAAAA
AATCCGGATG CCCAGCGTTA TAAGGCGGTG CGTTTATTGC AATCGCGCAA TAAAGTGGTA
TTAACCGGCA CGCCGATAGA AAACAATACC TATGATCTTT ATGGGCAGCT TTCTTTCGCT
TGTCCCGGCT TATTGGGTTC CAGACAACAG TTTAAAGAGT TGTATGCGGT GCCCATTGAT
CAGTTCAAAG ACAGCAAACG GGCAAAGGAA CTCCAAAAAA AGATCAGCCC TTTCATTTTG
AGGCGTACCA AAGAGCAGGT AGCTAAAGAG CTGCCCGATA AAACCGAAAT GGTCATTTAC
TGCGAAATGG GGACAGAGCA ACGTGAGGTT TACGAAGCCG CAGTGCAGGA CATTAAAGAA
TATATTGAGG GCAAGGCCGA AGATGAACTG GCCAAAAGCA GCATGTACGT TTTGCAGGGC
ATCACCCGCT TACGGCAAAT CTGTAATTCG GCCACTTTAT TAAAAGACGA TAAGTTCTAT
GGCAATGCCT CTTCCAAAAT GGAAGTGCTG CTGGAACAGA TCGAAAGTAA ATCCCCTAAC
CACAAGATCC TGGTGTTTTC TCAGTTTGTA GGGATGCTGG ACCTGATCCG GGCCCAGCTT
GGAGAGCGTG GCATTGCACA TGAATACTTA ACCGGCCAGA CCCGCAACCG GCAGCAGGTG
GTCAATTCTT TTCAGGACAA TCCCGAGATA CGTGTATTTC TTATCAGCTT AAAAGCCGGC
GGGGTAGGGT TAAACTTAAC CCGTGCCGAT TATGTATACC TGGTAGACCC CTGGTGGAAT
CCGGCGGTAG AAAACCAGGC GATAGACCGG ACTTACCGCA TCGGACAGGA AAAAAATGTG
GTGGCTGTAC GTTTAATTTG TCCGGATACC ATCGAAGAGA AGATCATGAA ACTGCAAAAT
ACCAAGAGAG ACCTGGTAGA TGACCTCATC AAAACCGATG TTTCCATCTA TAAAACACTT
TCCAAAAAAG ATCTGCTCGG TTTGTTCAGT TAA
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| Protein sequence | MQVEKVVYTP AHDYILADFN LSALNLSDIL KHNKVGADTS AKGFYELVPA EISLNFAVFG
DAGGEMNNPL VTVTQTPDRV LLSCSCPSAA DGLCEFQARA LYNIMERQPL RLFFDAPLRH
KKLKEFAQDY GLEQEKNPDD HFELSYIKGS LGISPKVKTL FPVTQKTKAE LAASLLPKKE
FNLPVSGGLI KKEMQTIVVF SQHRYYSHLN ISLYEGQASR DGKIKNPLKA IDPSDLLWTT
ENISELKFLN GVLKFQNNYN AEASGSDLEG LRALARNPLG LDIYLHDPKI SPNISATSIS
RIKLKILGID LVLSVNEKGD FYEVSGKLML DDQAIPLENL SIKHHYFIQL DKTLHLIDKP
DFLRVIEFFK KHYDKMLIHR SKFDDFYENI LSNLEEKVRI NYAYLKPATK KQIEDKGYDL
ENEQLIYLSE SEDFVLITPV MRYSNTEIPV LSRKQIIAKD KYGHTFSLRR DEAAELQFIA
DIAKQHPFFE EQQDEDLRLD CFYMHRKHFL DIEWFLNAFE AWRSKGITIL GFNQLKNNNL
SQYKANISIK VISGVDWFET KAKVEYNDQA ISLKHLHKSI RNKSKFVKLD DGTMGILPDE
WIEKFTSYFN AGELVEESIH THKINYNKIA ELYDEQLFDE SVKDQLALYR AKLSGPESIL
PVPVPEGLNA ELRGYQQDGL NWLNFLDGFN FGACLADDMG LGKTIQIIAF ILSQRNKGHQ
NTNLVVVPAS LIFNWQAEVA KFAPSLKIHT VYGADRLKDI HQFDQYEIVL TSYGTLLADI
RFLKSYYFNY IFLDESQTIK NPDAQRYKAV RLLQSRNKVV LTGTPIENNT YDLYGQLSFA
CPGLLGSRQQ FKELYAVPID QFKDSKRAKE LQKKISPFIL RRTKEQVAKE LPDKTEMVIY
CEMGTEQREV YEAAVQDIKE YIEGKAEDEL AKSSMYVLQG ITRLRQICNS ATLLKDDKFY
GNASSKMEVL LEQIESKSPN HKILVFSQFV GMLDLIRAQL GERGIAHEYL TGQTRNRQQV
VNSFQDNPEI RVFLISLKAG GVGLNLTRAD YVYLVDPWWN PAVENQAIDR TYRIGQEKNV
VAVRLICPDT IEEKIMKLQN TKRDLVDDLI KTDVSIYKTL SKKDLLGLFS
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