Gene Phep_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0422 
Symbol 
ID8251507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp495235 
End bp496362 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content44% 
IMG OID644934070 
Productalanine racemase domain protein 
Protein accessionYP_003090708 
Protein GI255530336 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.25144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAG AGATGACGGA ACAGCAATGG TATGCTATAA ACAATACCGA CCAGTTGGAT 
ACACCAGCCC TGGTCGTTTA CCTGGATAGG GTCAAAACAA ATATTCAGCA TGCTATCGAT
ATCATTGCCG ATCCAGCACG CTTAAGACCC CATGTTAAAA CACATAAAAC AAAGGAAGTT
AGCCGTTTGC TAATGGATGC AGGCGTAAAT AAATTTAAAT GCGCCACTAT TGCAGAAGCC
GAAATGCTGG GAATGCTTGC TGCAAAAGAT GTTTTACTGG CTTATCAGCC CTTTGGGCCT
AAACTGGCCA GGCTGATCTC TTTGATCAGA AAATATCCGG ATACCAGGTT CTCCTGCCTG
ATCGATAACC TTGAAACTGC AAAAAATATA TCGGCTTTGG CCAGTTCCGA ACAGTTAGAA
CTCCCTGTTT ATATCGATCT GAATGTAGGA ATGAACAGGA CCGGCATCCA GCCGGATCAT
TGTGCCATAC AGTTATTTGA GGATGCAGTT AAATTAAATG GCATTCAATT GCTTGGCCTT
CATGCTTATG ATGGGCACAT ACAGCAGGTC CCTGTTCAGG AAAGGGAAAC CTTATGCGAA
GAGATATTTT TGATGGTCGA ATCCTTAAAA CAGGAATTGG AAAAAAGAGG ATACCAGCAG
CTAAATATCA TTATCGGGGG CTCCCCTGGT TTCCCGGTCT ACGCCAAAAA GCCTGGTGTC
GAATGTAGTC CCGGTACTTT TGTTTTTTGG GATAAAAGTT ATCTGGATGA CCTTTCTGAA
CAAGGCTTTC TTCCGGCTGC CCTGGTATTG AGCAGGGTCG TTTCCTTACC CGGCAGTACA
AAAGTATGTA TGGATCTGGG CCATAAATCT ATCGCAGCTG AACGTGTTTT GTCGCAGCGG
GGCTACTTTC TGAATGCTCC CGATTTTAAA GTTGAAAGCC AGAGTGAAGA ACACCTGGTG
CTCGACGCAG CTGAAAACCA TCCCTGGAAA ATTGGTGATC TTTTTTATGT CCTGCCCTAT
CATATTTGTC CAACCTGCGC CCTTTATGAA GCCGCAACAC TGATTGAAGA CAGGAAAGCC
ACCGCTAGCT GGAAGATCAT TGCAAGGGAC AGGAAAATAT TTACATAA
 
Protein sequence
MQKEMTEQQW YAINNTDQLD TPALVVYLDR VKTNIQHAID IIADPARLRP HVKTHKTKEV 
SRLLMDAGVN KFKCATIAEA EMLGMLAAKD VLLAYQPFGP KLARLISLIR KYPDTRFSCL
IDNLETAKNI SALASSEQLE LPVYIDLNVG MNRTGIQPDH CAIQLFEDAV KLNGIQLLGL
HAYDGHIQQV PVQERETLCE EIFLMVESLK QELEKRGYQQ LNIIIGGSPG FPVYAKKPGV
ECSPGTFVFW DKSYLDDLSE QGFLPAALVL SRVVSLPGST KVCMDLGHKS IAAERVLSQR
GYFLNAPDFK VESQSEEHLV LDAAENHPWK IGDLFYVLPY HICPTCALYE AATLIEDRKA
TASWKIIARD RKIFT