Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0422 |
Symbol | |
ID | 8251507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 495235 |
End bp | 496362 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644934070 |
Product | alanine racemase domain protein |
Protein accession | YP_003090708 |
Protein GI | 255530336 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.25144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAG AGATGACGGA ACAGCAATGG TATGCTATAA ACAATACCGA CCAGTTGGAT ACACCAGCCC TGGTCGTTTA CCTGGATAGG GTCAAAACAA ATATTCAGCA TGCTATCGAT ATCATTGCCG ATCCAGCACG CTTAAGACCC CATGTTAAAA CACATAAAAC AAAGGAAGTT AGCCGTTTGC TAATGGATGC AGGCGTAAAT AAATTTAAAT GCGCCACTAT TGCAGAAGCC GAAATGCTGG GAATGCTTGC TGCAAAAGAT GTTTTACTGG CTTATCAGCC CTTTGGGCCT AAACTGGCCA GGCTGATCTC TTTGATCAGA AAATATCCGG ATACCAGGTT CTCCTGCCTG ATCGATAACC TTGAAACTGC AAAAAATATA TCGGCTTTGG CCAGTTCCGA ACAGTTAGAA CTCCCTGTTT ATATCGATCT GAATGTAGGA ATGAACAGGA CCGGCATCCA GCCGGATCAT TGTGCCATAC AGTTATTTGA GGATGCAGTT AAATTAAATG GCATTCAATT GCTTGGCCTT CATGCTTATG ATGGGCACAT ACAGCAGGTC CCTGTTCAGG AAAGGGAAAC CTTATGCGAA GAGATATTTT TGATGGTCGA ATCCTTAAAA CAGGAATTGG AAAAAAGAGG ATACCAGCAG CTAAATATCA TTATCGGGGG CTCCCCTGGT TTCCCGGTCT ACGCCAAAAA GCCTGGTGTC GAATGTAGTC CCGGTACTTT TGTTTTTTGG GATAAAAGTT ATCTGGATGA CCTTTCTGAA CAAGGCTTTC TTCCGGCTGC CCTGGTATTG AGCAGGGTCG TTTCCTTACC CGGCAGTACA AAAGTATGTA TGGATCTGGG CCATAAATCT ATCGCAGCTG AACGTGTTTT GTCGCAGCGG GGCTACTTTC TGAATGCTCC CGATTTTAAA GTTGAAAGCC AGAGTGAAGA ACACCTGGTG CTCGACGCAG CTGAAAACCA TCCCTGGAAA ATTGGTGATC TTTTTTATGT CCTGCCCTAT CATATTTGTC CAACCTGCGC CCTTTATGAA GCCGCAACAC TGATTGAAGA CAGGAAAGCC ACCGCTAGCT GGAAGATCAT TGCAAGGGAC AGGAAAATAT TTACATAA
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Protein sequence | MQKEMTEQQW YAINNTDQLD TPALVVYLDR VKTNIQHAID IIADPARLRP HVKTHKTKEV SRLLMDAGVN KFKCATIAEA EMLGMLAAKD VLLAYQPFGP KLARLISLIR KYPDTRFSCL IDNLETAKNI SALASSEQLE LPVYIDLNVG MNRTGIQPDH CAIQLFEDAV KLNGIQLLGL HAYDGHIQQV PVQERETLCE EIFLMVESLK QELEKRGYQQ LNIIIGGSPG FPVYAKKPGV ECSPGTFVFW DKSYLDDLSE QGFLPAALVL SRVVSLPGST KVCMDLGHKS IAAERVLSQR GYFLNAPDFK VESQSEEHLV LDAAENHPWK IGDLFYVLPY HICPTCALYE AATLIEDRKA TASWKIIARD RKIFT
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