| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0413 |
|---|
| Symbol | |
|---|
| ID | 8251498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 485889 |
|---|
| End bp | 486530 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644934061 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090699 |
|---|
| Protein GI | 255530327 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.377533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA TAGATAGATT TTTAAGTGAC GAACAGGATC CGAAGGCCGT TGAAAAGGTT
TTAGGAAAAC TAAATGACAT GCTAACCAGC AATGAGGAAC TGATTTATAT GGCAGTACAG
AAGAAACCGG CTGTAAATTT GCTTCCTGAT TGTATTGCGG TAAGTAACAA ACGTATTTTT
TATTGTGAGC CGGGCAATTT TGGCATCACC ATGAATTTTA AGGACATTTC CTGGAAAAGC
ATTAAAGAGG TCTCTTTTAA AGAAGAAATT TTTGGTTCTA AATTTATTTG TGTGCCTCTA
CATGGTGAAA ATATCATTAC AGAGTATATA CCTAAAGCGC AGGCCCGTAA ATTATATCAG
GCGGCTTATG AACAGCTGGA AGCTTTTAAA GAGCAGTTAA GACAAGCAGA GCTGGAGGAC
AGACGGTCTT CAACTTCACC GGTTACGGTA AATACTGTTC CTGCTGAGCC TGTAGCAGAT
GAGGTGTCTC ATGCCTTATT TTCGCAACCT TCTGCCCCTG TGGAAGAACC GGAAGACGAA
ACCACTTTAA AATTAAGAAA ACTGAAGAGC TTATATGATA AACACCTGAT TACACAGGAA
GAATATGAAG CAAAAAAAGC GGATATTTTA GACAGTTTAT AA
|
|---|
| Protein sequence | MILIDRFLSD EQDPKAVEKV LGKLNDMLTS NEELIYMAVQ KKPAVNLLPD CIAVSNKRIF
YCEPGNFGIT MNFKDISWKS IKEVSFKEEI FGSKFICVPL HGENIITEYI PKAQARKLYQ
AAYEQLEAFK EQLRQAELED RRSSTSPVTV NTVPAEPVAD EVSHALFSQP SAPVEEPEDE
TTLKLRKLKS LYDKHLITQE EYEAKKADIL DSL
|
|---|
| |