| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0411 |
|---|
| Symbol | |
|---|
| ID | 8251496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 482622 |
|---|
| End bp | 484262 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644934059 |
|---|
| Product | NAD+ synthetase |
|---|
| Protein accession | YP_003090697 |
|---|
| Protein GI | 255530325 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0171] NAD synthase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.172115 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CATTAGCACA GCTCAACTAT CATATCGGTA ACTTCGAATA CAATACCCAT
AAAATCATTG ACCATATTGA GCAGGCCAAA ATCCAGGGGG TTGATCTTAT TGTATTTGCC
GAGTTGGCTG TATGTGGTTA CCCCCCGCGT GATTTTCTTG AATTTGATGA GTTTATTGAA
CTTTGTGAAA AGTCGGCCCA GCAAATAGCG GAGCACTGTA AGGGCATAGC CTGTATTGTA
GGTCTGCCCG TTAAAAATGA TGTACTTGCG GGTAAAGACC TGTATAATGC AGCTTATTTT
ATAGAAGATG GCCGTTTAAA AAGAGTAGTA AAAAAAGCAT TGTTGCCCAA CTACGATGTA
TTTGATGAAT ACCGCTATTT TGAACCCGCA AGTCATTTTG AATGTATCGA TTTTCAAGGC
ATCAAAATAG CTGTTACCAT CTGTGAGGAT CTTTGGAACA TCAACAACAA TCCTTTATAT
ATTGCTTCTC CAATGGATGA GCTGATCAGG CAAAAGCCCA AACTGATGAT CAATATCGCA
GCCTCTCCAT TTTCTTATTG TCATGATGAG GAAAGGGTTG TGGTACTGTC AGACAATGCC
AGGAAATACA ATTTGCCATT GCTGTATGTA AACCAGGTAG GTGCACAGAC AGAGATCATT
TTTGACGGAG GCTCTCTGGC TTTCGATGCC AAAGGCAACC TGATCGACGA GATGCCTTAT
TTTAAGGAAG CCCTCCGCGT CTATGAATTT GAGGATAATA GGATTAAGGG CTATGTGCCC
ATGCAACACC AGGCCATTCC TGACATAGAA CAGATTCACC AAGCACTGGT AATGGGCATT
AAAGATTATT TTGCCAAATC AGGTTTTAGC AAAGCTGTTT TGGGTTTGTC CGGTGGTATC
GATTCTGCTA TAGTTTGTGC ACTGGCCTGC CGTGCCCTGG GGCCGGAAAA TGTAATGGCT
GTACTGATGC CCTCAAAATA TTCTTCAGAC CATTCTATCC AGGATGCCTT AGATCTGGTG
AAAAACATTG GCTGTGAGCA TGAGGTCATT CCTATAAAAG AAGCTGCTGA TGCGTTCGAC
AATATGATGG CCCCCGCTTT TAAGGACCTT CCATTTAACC TTACCGAAGA AAATATCCAG
GCCAGGTGCA GGGGTATCGT CGTTATGGCC ATGTCCAATA AGTTCGGCTA TATTTTGTTA
AATACATCCA ATAAAAGTGA ATGTGCTGTG GGGTATGGCA CATTATACGG CGATATGTGC
GGTGCTATCG GGGTAATTGG CGACGTGTAC AAAACACAGG TTTATCAGCT GGCCAATTAT
ATCAATAAAG ACGGCATTGT AATCCCCGAA AACTCTATTG TTAAGCCACC TTCAGCAGAA
CTCAGACCAG GCCAGAAAGA TTCTGATTCA TTGCCCGACT ACGATATCCT TGATAAAATC
CTGTTCCAGT ATATTGAACA GAAACAAAGC TCATCTGCTA TTATTGCACA AGGCTACGAC
GAAGGGTTGG TCAGGCGGAT CATCAAAATG GTAAATACAG CTGAGTTTAA ACGTTACCAG
ACCCCACCAA TCCTGCGTGT TTCACCTAAG GCATTTGGCA TGGGCCGAAG AATGCCAATT
GTAGGTAAAT ACCTTTCCTA G
|
|---|
| Protein sequence | MKIALAQLNY HIGNFEYNTH KIIDHIEQAK IQGVDLIVFA ELAVCGYPPR DFLEFDEFIE
LCEKSAQQIA EHCKGIACIV GLPVKNDVLA GKDLYNAAYF IEDGRLKRVV KKALLPNYDV
FDEYRYFEPA SHFECIDFQG IKIAVTICED LWNINNNPLY IASPMDELIR QKPKLMINIA
ASPFSYCHDE ERVVVLSDNA RKYNLPLLYV NQVGAQTEII FDGGSLAFDA KGNLIDEMPY
FKEALRVYEF EDNRIKGYVP MQHQAIPDIE QIHQALVMGI KDYFAKSGFS KAVLGLSGGI
DSAIVCALAC RALGPENVMA VLMPSKYSSD HSIQDALDLV KNIGCEHEVI PIKEAADAFD
NMMAPAFKDL PFNLTEENIQ ARCRGIVVMA MSNKFGYILL NTSNKSECAV GYGTLYGDMC
GAIGVIGDVY KTQVYQLANY INKDGIVIPE NSIVKPPSAE LRPGQKDSDS LPDYDILDKI
LFQYIEQKQS SSAIIAQGYD EGLVRRIIKM VNTAEFKRYQ TPPILRVSPK AFGMGRRMPI
VGKYLS
|
|---|
| |