Gene Phep_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0407 
Symbol 
ID8251492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp479373 
End bp480092 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content39% 
IMG OID644934055 
Product2-phosphosulfolactate phosphatase 
Protein accessionYP_003090693 
Protein GI255530321 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2045] Phosphosulfolactate phosphohydrolase and related enzymes 
TIGRFAM ID[TIGR00298] 2-phosphosulfolactate phosphatase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.932789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.264008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAA AAAGCATAGA AGTTTGTTTA ACTCCTGCAT TATTAAACCT GTACGATATT 
AAAGAAAGCG TTGTTGTCGT TATTGATATT TTAAGGGCAA CATCTTCCAT TGTATATGGT
ATTGACAATG GAGCAACTGC AATTATTCCG GTTGCCCATG TTGAAGATTG CTTAAACTAT
GCAGATAAAG GCTATTTATT GGCAGCAGAA AGAAATGGAG AAGTTGTAGC AGGTTACGAC
TTTGGCAACT CTCCATTTTC TTACGTTAGT GATAAGGTTA AAAATAAAAC AGTAGTGCTG
ACTACCACCA ATGGAACAAA AGCATTGCAC CTTGCCCAGG TAAATGCGCA TCAGGTAGTA
ATTGGTGCTT TTCTCAATTT AAAGGCACTA TGTAGCTGGC TTAAATCCCA GGAAAAAGAT
GTACTGCTGC TTTGTGCCGG CTGGAAAGAT AAATTTAACC TGGAAGATAC CCTTTTTGCT
GGTGCAGTAG TAAATGAACT TCGTAAGGAT TTTACACATT TTGATGATTC ATGTGTTGCG
GCAGAAGACT TGTACCTGCT GGCTAAAGAT GACCTTAGAA ATTATCTTCA TAAATCATCA
CACAGTCACC GATTGGCCGA GCTGAACATT GAAGAAGATG TGAAATTTTG TTTACAGCTT
AATATATGCC AGGCAATCCC TGTACTGGTA GGGGAGGCGC TGGTAGCCTT AAAGGCTTAG
 
Protein sequence
MHKKSIEVCL TPALLNLYDI KESVVVVIDI LRATSSIVYG IDNGATAIIP VAHVEDCLNY 
ADKGYLLAAE RNGEVVAGYD FGNSPFSYVS DKVKNKTVVL TTTNGTKALH LAQVNAHQVV
IGAFLNLKAL CSWLKSQEKD VLLLCAGWKD KFNLEDTLFA GAVVNELRKD FTHFDDSCVA
AEDLYLLAKD DLRNYLHKSS HSHRLAELNI EEDVKFCLQL NICQAIPVLV GEALVALKA