Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0407 |
Symbol | |
ID | 8251492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 479373 |
End bp | 480092 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644934055 |
Product | 2-phosphosulfolactate phosphatase |
Protein accession | YP_003090693 |
Protein GI | 255530321 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG2045] Phosphosulfolactate phosphohydrolase and related enzymes |
TIGRFAM ID | [TIGR00298] 2-phosphosulfolactate phosphatase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.932789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.264008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATAAAA AAAGCATAGA AGTTTGTTTA ACTCCTGCAT TATTAAACCT GTACGATATT AAAGAAAGCG TTGTTGTCGT TATTGATATT TTAAGGGCAA CATCTTCCAT TGTATATGGT ATTGACAATG GAGCAACTGC AATTATTCCG GTTGCCCATG TTGAAGATTG CTTAAACTAT GCAGATAAAG GCTATTTATT GGCAGCAGAA AGAAATGGAG AAGTTGTAGC AGGTTACGAC TTTGGCAACT CTCCATTTTC TTACGTTAGT GATAAGGTTA AAAATAAAAC AGTAGTGCTG ACTACCACCA ATGGAACAAA AGCATTGCAC CTTGCCCAGG TAAATGCGCA TCAGGTAGTA ATTGGTGCTT TTCTCAATTT AAAGGCACTA TGTAGCTGGC TTAAATCCCA GGAAAAAGAT GTACTGCTGC TTTGTGCCGG CTGGAAAGAT AAATTTAACC TGGAAGATAC CCTTTTTGCT GGTGCAGTAG TAAATGAACT TCGTAAGGAT TTTACACATT TTGATGATTC ATGTGTTGCG GCAGAAGACT TGTACCTGCT GGCTAAAGAT GACCTTAGAA ATTATCTTCA TAAATCATCA CACAGTCACC GATTGGCCGA GCTGAACATT GAAGAAGATG TGAAATTTTG TTTACAGCTT AATATATGCC AGGCAATCCC TGTACTGGTA GGGGAGGCGC TGGTAGCCTT AAAGGCTTAG
|
Protein sequence | MHKKSIEVCL TPALLNLYDI KESVVVVIDI LRATSSIVYG IDNGATAIIP VAHVEDCLNY ADKGYLLAAE RNGEVVAGYD FGNSPFSYVS DKVKNKTVVL TTTNGTKALH LAQVNAHQVV IGAFLNLKAL CSWLKSQEKD VLLLCAGWKD KFNLEDTLFA GAVVNELRKD FTHFDDSCVA AEDLYLLAKD DLRNYLHKSS HSHRLAELNI EEDVKFCLQL NICQAIPVLV GEALVALKA
|
| |