Gene Phep_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0404 
SymbolrnhB 
ID8251489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp476384 
End bp476995 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content42% 
IMG OID644934052 
Productribonuclease HII 
Protein accessionYP_003090690 
Protein GI255530318 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.505687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTGA ACTGTTATCA GCAAGAATTT ATAGAAGCCG GATGCGATGA AGCTGGGCGG 
GGCTGTCTGG CAGGACCTGT ATTTGCTGCT GCAGTGATTT TGCCGCCAGA TTTTATTGCC
GGGGAGCTGA ATGATTCAAA ACAGCTTAAT CATCAGCAAC GTAAAAGACT TAGGATCATT
ATAGAAAAAG AGGCCATCGC ATGGGCAGTT GCTGAAGTTG ACAATATAGA AATTGATCAG
ATCAATATTT TGAATGCCTC CTTTCTCGCT ATGCACAGGG CCATAGAGAA ATTACTGGTT
AAACCCCAAT ATTTAAGTAT TGACGGCAAC CGGTTTAAAA AATATCCTGA TATCCCCCAT
GCCTGTATTG TTAAAGGAGA TGGTAAATAC CTGAACATAG CAGCGGCCTC CATATTGGCC
AAAACTCATA GAGATGAGTT TATGGAACGT ATTTCAGATG AATATCCGCA TTATCAATGG
CATCAGAATA AAGGCTACCC AACAGTGGTA CACCGTTCTG CTGCACTTGA GCATGGTTTA
TCGCCATATC ATCGTAAAAC TTTTACAGTT AGTCCCCCTC AACTTAACCT GTTTTCCGAA
ATAGAGGGAT AA
 
Protein sequence
MLLNCYQQEF IEAGCDEAGR GCLAGPVFAA AVILPPDFIA GELNDSKQLN HQQRKRLRII 
IEKEAIAWAV AEVDNIEIDQ INILNASFLA MHRAIEKLLV KPQYLSIDGN RFKKYPDIPH
ACIVKGDGKY LNIAAASILA KTHRDEFMER ISDEYPHYQW HQNKGYPTVV HRSAALEHGL
SPYHRKTFTV SPPQLNLFSE IEG