Gene Phep_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0394 
Symbol 
ID8251479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp467525 
End bp468022 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content38% 
IMG OID644934042 
ProductATP synthase F0, B subunit 
Protein accessionYP_003090680 
Protein GI255530308 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.501074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTT TAGTTCTCCC AAGTATAGGA TTGGTTTTTT GGACAGCGAT AGCATTTATC 
TGCTTGTTGA TTTTGCTTAA AAAATTTGCA TGGAAACCTA TTTTAGCCTC TATTCACGAA
CGTGAGCAAA GCATTGATGA GGCTTTGAAT AAAGCTGAAC TGGCTAAACA GGAAATGGCA
CGTTTAACTA CTCAGAACGA AGAGCTGCTT AAGCAAGCTC GTTCAGAACG TGATCTGATC
CTTAAAGAAG CGAAAGCCCT TAAAGACAGT ATTGTTAATG AAGCAAAAAC ACAGGCGCAC
AATGAAGGTG CTAAACTGAT TGAAAAAGCA AAGATTGAGA TTGAGAATCA GAAAAAGGCA
GCTTTGGCTG AATTGAAAAC CCAGGTTTCA ACTTTATCAT TGGATATTGC TGAGCGCGTA
TTGCGCAATC AACTCCAGGA TAAAGCTAAA CAAGAGGATT TAGTCGCTAA TCTTTTAAAA
GATGTTGAAT TAAACTAG
 
Protein sequence
MNPLVLPSIG LVFWTAIAFI CLLILLKKFA WKPILASIHE REQSIDEALN KAELAKQEMA 
RLTTQNEELL KQARSERDLI LKEAKALKDS IVNEAKTQAH NEGAKLIEKA KIEIENQKKA
ALAELKTQVS TLSLDIAERV LRNQLQDKAK QEDLVANLLK DVELN