| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0380 |
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| Symbol | |
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| ID | 8251465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 450511 |
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| End bp | 451650 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934028 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_003090666 |
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| Protein GI | 255530294 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.182118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAA TTTATATCCA CATCCCATTC TGCAAAAAAG CCTGTACCTA TTGTGATTTT
CATTTCAGCA CTTCTTTAAA ATATATAGAT GAAATGACTG ATGCGATATG TACAGAGATC
ATTAAAAAAC AGGACAGGAT AACCGGACAG GTGGGCAGTA TTTATTTTGG TGGGGGAACT
CCTTCGGTGC TTCCGGCCAG ATCGTTCGAA AAGATTTTTC ATACCCTAAC CCGGCATTTC
TCGATCTCTT CTGAGGCAGA AATTACCATT GAAGCTAATC CTGACGATCT GGATGCCAAA
AAAATCACTG AACTGAGACA GCTCCCTGTA AACCGGTTCA GCATCGGCAT CCAGTCTTTT
TTTGAAGAAG ACCTGATCTG GATGAACCGG GCACATAGTG CCAAGGAAGC TGAAGATTGT
ATCAAACGTA GTCAGGATGC CGGTTTTGAA AACCTGAGCA TTGATCTCAT TTACGGCTAC
CCTTTACTGA CCGACAATAA ATGGCAGCGA AACATCCAAA AAGCGATTGA GTTCCAAACC
CCGCACATTT CAGCCTATTC GCTTACCGTT GAACCCAGGA CTGCCCTGGC CAGTGCCATT
AAAAAGGGGA AACAGGTTCC CGTTAATGAA GAACAAAGTG CTGCCCAGTT CCTTACCCTG
ATCAACAAAT TAAAAGAGGG GGGATTTGAA CATTACGAAA TCTCCAATTT TAGTCAGCCG
GGCAAATATG CGGTGCACAA TACCAATTAC TGGCGCGGTG TACCTTACCT GGGTATCGGC
CCTGCTGCGC ATGGATTTGA TGGGCAGAAC CGCTACCTTA ACATAGCAAA CAATGCTGCT
TATTTAAGTG CCTTACAGGC AGGAAACCTG GCCGAAACAA TTGAGGAATT GAGTACATAC
GACAGATTTA ATGAATACAT CATGACTTCT CTCCGTACCG TCTGGGGCAC CAGTCTGCAA
AAGATCATGG CAGATTTTGG AAAGGAATTT TTAACCGGCA CCCTAAAAAG CATACAACCT
TTTATAGAAA AACAATGGCT CATAAACCAA AACCAACAAC TGATTCTGAC ACAGGAAGGT
AAATTATTTG CTGATCACAT CGCATCTGAA TTATTTCTGA TACAAGATGA CCATCTTTAA
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| Protein sequence | MSGIYIHIPF CKKACTYCDF HFSTSLKYID EMTDAICTEI IKKQDRITGQ VGSIYFGGGT
PSVLPARSFE KIFHTLTRHF SISSEAEITI EANPDDLDAK KITELRQLPV NRFSIGIQSF
FEEDLIWMNR AHSAKEAEDC IKRSQDAGFE NLSIDLIYGY PLLTDNKWQR NIQKAIEFQT
PHISAYSLTV EPRTALASAI KKGKQVPVNE EQSAAQFLTL INKLKEGGFE HYEISNFSQP
GKYAVHNTNY WRGVPYLGIG PAAHGFDGQN RYLNIANNAA YLSALQAGNL AETIEELSTY
DRFNEYIMTS LRTVWGTSLQ KIMADFGKEF LTGTLKSIQP FIEKQWLINQ NQQLILTQEG
KLFADHIASE LFLIQDDHL
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