Gene Phep_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0374 
Symbol 
ID8251459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp442382 
End bp442933 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content42% 
IMG OID644934022 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003090660 
Protein GI255530288 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA TTATTTTATC AGCAATTGCC ATAGTAGCTC TGGCATTCAC AACACAGGTT 
TACGCTCAAA AAAATCCGAT GGTAGGTGGT GCTGCAATGT ACGCCACAAA AGACATTGTA
GACAATGCAG TAAACTCTAA AGACCATACT ACACTTGTTG CTGCCGTTAA AGCAGCCGGA
TTGGTCGAAA CTTTAAAAGG AGCAGGACCA TTTACTGTTT TTGCCCCAAC AAATGCTGCA
TTCAACAAAC TGCCTGCCGG AACGGTAGCG ACCCTACTGA AACCTGAAAA CAAATCCGCC
TTAACCAAAG TATTAACTTA TCATGTTGTT GCCGGTAAAT GGACTGCGGC AGACATTGAC
AAAGCCATCA AAAAAGGAAA AGGCAAAACA GAACTGACTA CTGTTGAAGG CGGTAAACTC
TGGGCATGGA TGGAAGGAAA AAAATTAGTA CTTAAGGATG AAAAAGGCGG AACTGCAACG
GTTACCATTG CCAACGTAAT GCAAAAAAAT GGAGTGATCC ATGTGATTGA TACCGTATTG
ATGCCAAAAT AA
 
Protein sequence
MKRIILSAIA IVALAFTTQV YAQKNPMVGG AAMYATKDIV DNAVNSKDHT TLVAAVKAAG 
LVETLKGAGP FTVFAPTNAA FNKLPAGTVA TLLKPENKSA LTKVLTYHVV AGKWTAADID
KAIKKGKGKT ELTTVEGGKL WAWMEGKKLV LKDEKGGTAT VTIANVMQKN GVIHVIDTVL
MPK