Gene Phep_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0371 
Symbol 
ID8251456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp439180 
End bp440277 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content45% 
IMG OID644934019 
Productvon Willebrand factor type A 
Protein accessionYP_003090657 
Protein GI255530285 
COG category[R] General function prediction only 
COG ID[COG4867] Uncharacterized protein with a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGGT TCCAATTTTC TGATTTTAAA CCTGATGATC TGCCCAAAGG CGGATTTGAT 
GAATTGCTCA AACTCTTTAC CCAATTGCTC AACTATACCG CGGGCGATGC AGGGGAAACC
CTTGCCTGGA TGAACGAGCT GGATAAGCAG TATAAGTTTA CCAATAATGA ATATGGTATG
GGCGATTTTA TAGATGACCT GAAAGAAAAG GGTTATTTAC AGGAAAATCC TGCTAATGGC
GACCTGAGCA TTACCGCCAA AACAGAACAG ACCATCCGGC AATCGGCTCT GGAAGAGATT
TTTGGCAAGC TGAAAAAGGC CGGTAAAGGA AACCACAACA GCAACATTTC GGGCATAGGG
GAAGAAAAAA ATGCCGACAG ACGGGAATAT ACCTTTGGCG ATAGTCTGGA CCAGATCGAC
ATGACTGCTT CCATCCACAA TGCCCAGATC AATCATGGCA TCGGCAACTT CACCCTTACC
GAACGCGATC TGGAAGTAGA AGAGAAAGAC TATAAGACCC TTACTTCCAC AGTGCTGATG
ATAGACATTT CCCATTCCAT GATCCTTTAC GGTGAAGACC GCATCACACC TGCAAAGAAG
GTAGCCATGG CCCTTGCCGA GCTCATTAAA ACCCGGTACC CCAAAGACAC TTTAGACATT
GTCGTTTTTG GGAACGATGC CTGGCCCATT ACCGTAAAAG ATTTGCCTTA TTTACAGGTA
GGACCTTACC ATACCAATAC TTTTGCAGGT CTGGAACTGG CTACCGATCT ATTGCGCAGG
CGCAAGACCC ATAACAAACA GATCTTTATG ATCACAGACG GTAAGCCTAC CTGCTTAAAG
GAAAACGGCC GTTATTATAA GAACAGTATG GGGCTGGACA GAAAGGTCAT CAATAAGACC
TTAAACATGG CCGCGCAATG TAAACGCCTG GGCATACCCA TCACTACCTT TATGATTGCC
CAGGACCCCT ATCTGCAGCA ATTTGTACGT GAATTTACAC AGATCAACGG GGGCAGGGCG
TTTTATAGCT CACTGAACGG ACTGGGAGAA TACATTTTTG AAGACTACAT TAAAAACCGA
AGAAAGACAG TTAGATAA
 
Protein sequence
MRGFQFSDFK PDDLPKGGFD ELLKLFTQLL NYTAGDAGET LAWMNELDKQ YKFTNNEYGM 
GDFIDDLKEK GYLQENPANG DLSITAKTEQ TIRQSALEEI FGKLKKAGKG NHNSNISGIG
EEKNADRREY TFGDSLDQID MTASIHNAQI NHGIGNFTLT ERDLEVEEKD YKTLTSTVLM
IDISHSMILY GEDRITPAKK VAMALAELIK TRYPKDTLDI VVFGNDAWPI TVKDLPYLQV
GPYHTNTFAG LELATDLLRR RKTHNKQIFM ITDGKPTCLK ENGRYYKNSM GLDRKVINKT
LNMAAQCKRL GIPITTFMIA QDPYLQQFVR EFTQINGGRA FYSSLNGLGE YIFEDYIKNR
RKTVR