Gene Phep_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0366 
Symbol 
ID8251451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp433149 
End bp434816 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content41% 
IMG OID644934014 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003090652 
Protein GI255530280 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAG AGAAAAAAGA CGGTTACCGT AAGAATTTTT CATTGATACT CACCTTCATC 
GTGCTGATGT CTGTCCTGTT CCTGCTTTCG CTGGGCCTGG CCTATAGGTT CAGTACAAAA
TACATTGAGA ATGAGTTTGT ATCGGAGAAG GTAAACGTGC TTGAAGAGAG TATCAAGGCG
TATAACGACT TTTTTCAAAA GAAACTACCG GAAGTGTCTT ATTATAATGG CTACCTGGAT
TCTGCAACGG CAGCCAGTTT TGTGGATACC GTTTTGCTGG AATATCCTTT TGTTTCGAAA
GTTGTTTTTT ATGATTCGGA AGTGAGCAAT GCGCCGGTCA GCGATGGCTT AAATATTGGT
AGATTCTCTT TCGGCCCTAA AAACATTTAC CAGTTTGGCA GCCTGGTGCC CCTGGATTCA
GTACAGTTGT TCTCGAGGAA CAATACCCGT AATTTTATTG TTGGGGACGA TTTCAATACC
CTGGGTTTAA AGCTGGTGTC TTATATAGAA GGCCTGGATA CTACCCGTGT ACCAGGGCAG
GATGAGCTGT TCAGCAATTT CAGTATTGTC AGGTCCAACA AGATCACCTA CCTGAACATC
CCCCGGATGG AGGACTTGAA AGTGTATAAG AAAATGATGC GCAGCCGCCT TGCAGCGAAT
CCTGTTTATC AGCAGGATAT GCTGTCGTTC CAGCTGGATC CTTATAAAAT AAAGATCAAA
AATACCCGCC CGCTTTTATA TCAGTACATT AAAATAGAGC CGCTTACTTA CGACCCTTTG
GATACAACCG AAGTATACCT GAGCACGGAG ATCACTTTAC CGGGCCCGTT TTCTGATTAT
AAACTATATT TTATTTCTTC AAAGTCTTTT ATTGAAAAGG AAGTGTTTAG TTATTTTCTT
CCTATTGCAG TGGCAATCCT GTTGTTTTAC AGTATTGTGG TATTGGTAGC CTTTTTAATT
TACCGCAACC TGAACATTAA CCAGAAGATG TTTAAACTGC AATATGATTT TGTAAACAAC
CTTACACATG AGTTTAAGAC ACCGGTTAGC GTGATAAAGA TTGCAGGGAA CAACATTAAA
AGTGCTGCGG CGCTGACAGA CAGGGAACTG AAGATGTATG GAAAAATACT GGATGAAGAG
GCCGACAAGC TAAATGGACT GATGAATAAG CTGCTTGCCT TTACACAGAT AGAAAATAAG
GCGATTGCCC TGAACAGGGA TGAGATCAAG ATGCTGGACT TTTTGGAAAG TACTGTTGAA
TCACATCGGT TAAAACACCC TGATTTCGAC TTCAGTTATG AGGTTTCAGG GTTTACTACT
TTTGTGACCG ATCCGGTACT GCTGGGCAGT TTGTTTGATA ACCTTGCTGA AAATGCCTAT
AAATATTCGC CCGCAGAACG TAAAAAACTA CACATCAGTG CCAGGCTGAT TAAAGGGAAA
GTGGTGTTTA GGTTTACAGA CCAGGGCATT GGTATACCTG CATCAGAAAT TAATAATATA
TTTAAGAAGT TTTTCCGGAT ACAAAATCAG TACAACCAGA ATGGGAGCGT TGGCTTGGGG
CTGGCTTTTT GTAAGGAACT GGTTAATTTT ATGAAGGGTG AAATTACAGT GAGAAGTAAG
GTGAACAAAG GAACAGAATT TAAGATTGTA CTACCATATA ATGATTAA
 
Protein sequence
MASEKKDGYR KNFSLILTFI VLMSVLFLLS LGLAYRFSTK YIENEFVSEK VNVLEESIKA 
YNDFFQKKLP EVSYYNGYLD SATAASFVDT VLLEYPFVSK VVFYDSEVSN APVSDGLNIG
RFSFGPKNIY QFGSLVPLDS VQLFSRNNTR NFIVGDDFNT LGLKLVSYIE GLDTTRVPGQ
DELFSNFSIV RSNKITYLNI PRMEDLKVYK KMMRSRLAAN PVYQQDMLSF QLDPYKIKIK
NTRPLLYQYI KIEPLTYDPL DTTEVYLSTE ITLPGPFSDY KLYFISSKSF IEKEVFSYFL
PIAVAILLFY SIVVLVAFLI YRNLNINQKM FKLQYDFVNN LTHEFKTPVS VIKIAGNNIK
SAAALTDREL KMYGKILDEE ADKLNGLMNK LLAFTQIENK AIALNRDEIK MLDFLESTVE
SHRLKHPDFD FSYEVSGFTT FVTDPVLLGS LFDNLAENAY KYSPAERKKL HISARLIKGK
VVFRFTDQGI GIPASEINNI FKKFFRIQNQ YNQNGSVGLG LAFCKELVNF MKGEITVRSK
VNKGTEFKIV LPYND