Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0366 |
Symbol | |
ID | 8251451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 433149 |
End bp | 434816 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934014 |
Product | ATP-binding region ATPase domain protein |
Protein accession | YP_003090652 |
Protein GI | 255530280 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCAG AGAAAAAAGA CGGTTACCGT AAGAATTTTT CATTGATACT CACCTTCATC GTGCTGATGT CTGTCCTGTT CCTGCTTTCG CTGGGCCTGG CCTATAGGTT CAGTACAAAA TACATTGAGA ATGAGTTTGT ATCGGAGAAG GTAAACGTGC TTGAAGAGAG TATCAAGGCG TATAACGACT TTTTTCAAAA GAAACTACCG GAAGTGTCTT ATTATAATGG CTACCTGGAT TCTGCAACGG CAGCCAGTTT TGTGGATACC GTTTTGCTGG AATATCCTTT TGTTTCGAAA GTTGTTTTTT ATGATTCGGA AGTGAGCAAT GCGCCGGTCA GCGATGGCTT AAATATTGGT AGATTCTCTT TCGGCCCTAA AAACATTTAC CAGTTTGGCA GCCTGGTGCC CCTGGATTCA GTACAGTTGT TCTCGAGGAA CAATACCCGT AATTTTATTG TTGGGGACGA TTTCAATACC CTGGGTTTAA AGCTGGTGTC TTATATAGAA GGCCTGGATA CTACCCGTGT ACCAGGGCAG GATGAGCTGT TCAGCAATTT CAGTATTGTC AGGTCCAACA AGATCACCTA CCTGAACATC CCCCGGATGG AGGACTTGAA AGTGTATAAG AAAATGATGC GCAGCCGCCT TGCAGCGAAT CCTGTTTATC AGCAGGATAT GCTGTCGTTC CAGCTGGATC CTTATAAAAT AAAGATCAAA AATACCCGCC CGCTTTTATA TCAGTACATT AAAATAGAGC CGCTTACTTA CGACCCTTTG GATACAACCG AAGTATACCT GAGCACGGAG ATCACTTTAC CGGGCCCGTT TTCTGATTAT AAACTATATT TTATTTCTTC AAAGTCTTTT ATTGAAAAGG AAGTGTTTAG TTATTTTCTT CCTATTGCAG TGGCAATCCT GTTGTTTTAC AGTATTGTGG TATTGGTAGC CTTTTTAATT TACCGCAACC TGAACATTAA CCAGAAGATG TTTAAACTGC AATATGATTT TGTAAACAAC CTTACACATG AGTTTAAGAC ACCGGTTAGC GTGATAAAGA TTGCAGGGAA CAACATTAAA AGTGCTGCGG CGCTGACAGA CAGGGAACTG AAGATGTATG GAAAAATACT GGATGAAGAG GCCGACAAGC TAAATGGACT GATGAATAAG CTGCTTGCCT TTACACAGAT AGAAAATAAG GCGATTGCCC TGAACAGGGA TGAGATCAAG ATGCTGGACT TTTTGGAAAG TACTGTTGAA TCACATCGGT TAAAACACCC TGATTTCGAC TTCAGTTATG AGGTTTCAGG GTTTACTACT TTTGTGACCG ATCCGGTACT GCTGGGCAGT TTGTTTGATA ACCTTGCTGA AAATGCCTAT AAATATTCGC CCGCAGAACG TAAAAAACTA CACATCAGTG CCAGGCTGAT TAAAGGGAAA GTGGTGTTTA GGTTTACAGA CCAGGGCATT GGTATACCTG CATCAGAAAT TAATAATATA TTTAAGAAGT TTTTCCGGAT ACAAAATCAG TACAACCAGA ATGGGAGCGT TGGCTTGGGG CTGGCTTTTT GTAAGGAACT GGTTAATTTT ATGAAGGGTG AAATTACAGT GAGAAGTAAG GTGAACAAAG GAACAGAATT TAAGATTGTA CTACCATATA ATGATTAA
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Protein sequence | MASEKKDGYR KNFSLILTFI VLMSVLFLLS LGLAYRFSTK YIENEFVSEK VNVLEESIKA YNDFFQKKLP EVSYYNGYLD SATAASFVDT VLLEYPFVSK VVFYDSEVSN APVSDGLNIG RFSFGPKNIY QFGSLVPLDS VQLFSRNNTR NFIVGDDFNT LGLKLVSYIE GLDTTRVPGQ DELFSNFSIV RSNKITYLNI PRMEDLKVYK KMMRSRLAAN PVYQQDMLSF QLDPYKIKIK NTRPLLYQYI KIEPLTYDPL DTTEVYLSTE ITLPGPFSDY KLYFISSKSF IEKEVFSYFL PIAVAILLFY SIVVLVAFLI YRNLNINQKM FKLQYDFVNN LTHEFKTPVS VIKIAGNNIK SAAALTDREL KMYGKILDEE ADKLNGLMNK LLAFTQIENK AIALNRDEIK MLDFLESTVE SHRLKHPDFD FSYEVSGFTT FVTDPVLLGS LFDNLAENAY KYSPAERKKL HISARLIKGK VVFRFTDQGI GIPASEINNI FKKFFRIQNQ YNQNGSVGLG LAFCKELVNF MKGEITVRSK VNKGTEFKIV LPYND
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