| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0361 |
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| Symbol | |
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| ID | 8251446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 426833 |
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| End bp | 427387 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934009 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_003090647 |
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| Protein GI | 255530275 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATTA CACAAACACC ATTGGCCGGC CTTTTAGTAA TTGAGCCTAA GGTATGGAAA
GACAACCGTG GTTATTTTTA CGAAAGCTAT AATGCAAAGC TATTTGCTGA GGCCGGCATC
AGTGCTAATT TTGTGCAGGA CAACCAGTCC TTCTCACAAA AAGGGGCACT GCGCGGAATG
CACGCACAAA GTCCACCCTT TGAGCAGGGA AAGCTGGTCC GTGTACTGCA GGGTGCGGTA
TGGGATATTG CAGTCGACAT CAGAAAAGCA TCCCCTACTT ATGGTCAGCA TTTTGGTGTT
GAGCTGAGCA GCGAAAACCA CAAACAGCTT TGGGTACCCC CCGGATTTCT GCATGGTTTT
TTAACGCTGG AAGACCAGAC CATTTTTACT TACAAAGTAA GCAATTACTA TGATAAGGCC
TCAGAAATCG GGGTGATGTG GAACGATCCT GACCTGAACA TCAACTGGAA TGCCAGCATT
CCTGAACAGG ACCTGCTCTT GTCTGATAAA GACCTCCTCC TTTCTGCTTT TAAGGATTTT
AAAAGCCCTT TCTGA
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| Protein sequence | MQITQTPLAG LLVIEPKVWK DNRGYFYESY NAKLFAEAGI SANFVQDNQS FSQKGALRGM
HAQSPPFEQG KLVRVLQGAV WDIAVDIRKA SPTYGQHFGV ELSSENHKQL WVPPGFLHGF
LTLEDQTIFT YKVSNYYDKA SEIGVMWNDP DLNINWNASI PEQDLLLSDK DLLLSAFKDF
KSPF
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