Gene Phep_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0350 
Symbol 
ID8251435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp411319 
End bp412788 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content47% 
IMG OID644933998 
ProductNa+/solute symporter 
Protein accessionYP_003090636 
Protein GI255530264 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TAGATTATAT CGTACTGGCC GGTTATTTTT TAGTCCTCGT TTTAATGGGG 
ATATGGGGAT ATACCAAAAT CAAATCCTCG GCCGATTTTT ATACTGCCGG TGGTAAGTTG
CCCTGGTGGC TTTCGGGTAT TTCGCACCAT GTTTCCGGCT ATAGCGGTGC GGTATTCGTG
GCCTATGCAG CCATAGCCTA TAACTATGGT TTTACACTAT ACATGTGGTG GGCCCTCAGT
ATAGCCATTG CCATGGTGGG TACCGTATTT TTTATTGCAC CAAGGTGGGC CAGGTTAAGG
TCTAAAGCAG GTATACAATC GCCTACTGAA TACCTGGCTA CCCGTTACAA CCTCAGTACC
CAGCAGGTGA TGGCCTGGAG TGGGGTAATC ATTAAAATAT TTGATGTAGG TGCAAAATGG
GCGGCTATTG GCATCCTGTT AAACGCTTTT ACGGGTCTGC CCATAGCTAC GGGCATTTTA
ACAGCTGGTG TGGTCAGTAT GGTATACATT ACCATGGGTG GCCTTTGGGC CGATGTGGTG
AACGATCTGG CTTCCTTTCT GATCCAGTTT ACAGCGGGTA TCATTATGAT GGTGATGGTG
CTGATCCAGC TGGGCGATGG TTTAAATGGT ATATTTACGA TGTGGGACCG CCTACCGGCG
GCACATGGCC AGCTGTACAA TGGCCCCTAT ACACCGGCTT TTGCCATTTC TTTTACGGTC
ATCTGCTTTT TTAGTTTCAG CGGGGGTACC TGGCACCTGG CCACCCGGTT TATCTCATCG
CCATCTGGTA CTGAAGCCCG TAAGGCGGCA ACGCTTTCCA TGCTGATGTA CCTGATATGG
CCATTGATCC TGTTCTTTCC CATGTTTGCC GCACCAATCT TTATAAAAGA CCTGGCCGAC
CCCACACAAT CTTATGCCAT GATGGCCATA AAATTCCTGC CCCATGGTTT GGTAGGTCTG
TTGCTGGCCT CTATGTTTGG CAATACCCTG GCCATGACAG CTGCGGATGC CAATACCATT
TCGGCAGTAA TTACCCGCGA TATTATGCCG GTACTGTATA GAAAGATGAG CACCTTCAAT
CAGAAAAAAA TGTTGGTTAT TGCAAGGGTA ACCACTTTTC TTTTCATCCT GACCACACTG
ATCATTGCCT TTCAGTCCAA ATCTTTTGGT GGGGTGTTCG GACTGATCAT TACCTGGTTC
TCGGCTTTGG TTGGCCCTAC TGCTATACCA ATGATCCTTG GGCTGTTGCC TGCATTTAAA
CATAGCGACA GCAGGGCAGC ATTACTTTCT ATTTTTGGGG GACTGATCAC TTTTGCTGTA
ATGAAATCGT TTATGACGGT AAGCTTAACG GCAGAGCTGG CCTCGCCTAT TGTTACCTCT
ATGATTATTT ATATCGGCTG CGGCCTGTTT TTAAGGAGCA AAGTGAAACC GGAAGTTGAA
GCCCTGCTGG CTTCACTGAA AGAGGATTAA
 
Protein sequence
MEKIDYIVLA GYFLVLVLMG IWGYTKIKSS ADFYTAGGKL PWWLSGISHH VSGYSGAVFV 
AYAAIAYNYG FTLYMWWALS IAIAMVGTVF FIAPRWARLR SKAGIQSPTE YLATRYNLST
QQVMAWSGVI IKIFDVGAKW AAIGILLNAF TGLPIATGIL TAGVVSMVYI TMGGLWADVV
NDLASFLIQF TAGIIMMVMV LIQLGDGLNG IFTMWDRLPA AHGQLYNGPY TPAFAISFTV
ICFFSFSGGT WHLATRFISS PSGTEARKAA TLSMLMYLIW PLILFFPMFA APIFIKDLAD
PTQSYAMMAI KFLPHGLVGL LLASMFGNTL AMTAADANTI SAVITRDIMP VLYRKMSTFN
QKKMLVIARV TTFLFILTTL IIAFQSKSFG GVFGLIITWF SALVGPTAIP MILGLLPAFK
HSDSRAALLS IFGGLITFAV MKSFMTVSLT AELASPIVTS MIIYIGCGLF LRSKVKPEVE
ALLASLKED