Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0350 |
Symbol | |
ID | 8251435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 411319 |
End bp | 412788 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644933998 |
Product | Na+/solute symporter |
Protein accession | YP_003090636 |
Protein GI | 255530264 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA TAGATTATAT CGTACTGGCC GGTTATTTTT TAGTCCTCGT TTTAATGGGG ATATGGGGAT ATACCAAAAT CAAATCCTCG GCCGATTTTT ATACTGCCGG TGGTAAGTTG CCCTGGTGGC TTTCGGGTAT TTCGCACCAT GTTTCCGGCT ATAGCGGTGC GGTATTCGTG GCCTATGCAG CCATAGCCTA TAACTATGGT TTTACACTAT ACATGTGGTG GGCCCTCAGT ATAGCCATTG CCATGGTGGG TACCGTATTT TTTATTGCAC CAAGGTGGGC CAGGTTAAGG TCTAAAGCAG GTATACAATC GCCTACTGAA TACCTGGCTA CCCGTTACAA CCTCAGTACC CAGCAGGTGA TGGCCTGGAG TGGGGTAATC ATTAAAATAT TTGATGTAGG TGCAAAATGG GCGGCTATTG GCATCCTGTT AAACGCTTTT ACGGGTCTGC CCATAGCTAC GGGCATTTTA ACAGCTGGTG TGGTCAGTAT GGTATACATT ACCATGGGTG GCCTTTGGGC CGATGTGGTG AACGATCTGG CTTCCTTTCT GATCCAGTTT ACAGCGGGTA TCATTATGAT GGTGATGGTG CTGATCCAGC TGGGCGATGG TTTAAATGGT ATATTTACGA TGTGGGACCG CCTACCGGCG GCACATGGCC AGCTGTACAA TGGCCCCTAT ACACCGGCTT TTGCCATTTC TTTTACGGTC ATCTGCTTTT TTAGTTTCAG CGGGGGTACC TGGCACCTGG CCACCCGGTT TATCTCATCG CCATCTGGTA CTGAAGCCCG TAAGGCGGCA ACGCTTTCCA TGCTGATGTA CCTGATATGG CCATTGATCC TGTTCTTTCC CATGTTTGCC GCACCAATCT TTATAAAAGA CCTGGCCGAC CCCACACAAT CTTATGCCAT GATGGCCATA AAATTCCTGC CCCATGGTTT GGTAGGTCTG TTGCTGGCCT CTATGTTTGG CAATACCCTG GCCATGACAG CTGCGGATGC CAATACCATT TCGGCAGTAA TTACCCGCGA TATTATGCCG GTACTGTATA GAAAGATGAG CACCTTCAAT CAGAAAAAAA TGTTGGTTAT TGCAAGGGTA ACCACTTTTC TTTTCATCCT GACCACACTG ATCATTGCCT TTCAGTCCAA ATCTTTTGGT GGGGTGTTCG GACTGATCAT TACCTGGTTC TCGGCTTTGG TTGGCCCTAC TGCTATACCA ATGATCCTTG GGCTGTTGCC TGCATTTAAA CATAGCGACA GCAGGGCAGC ATTACTTTCT ATTTTTGGGG GACTGATCAC TTTTGCTGTA ATGAAATCGT TTATGACGGT AAGCTTAACG GCAGAGCTGG CCTCGCCTAT TGTTACCTCT ATGATTATTT ATATCGGCTG CGGCCTGTTT TTAAGGAGCA AAGTGAAACC GGAAGTTGAA GCCCTGCTGG CTTCACTGAA AGAGGATTAA
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Protein sequence | MEKIDYIVLA GYFLVLVLMG IWGYTKIKSS ADFYTAGGKL PWWLSGISHH VSGYSGAVFV AYAAIAYNYG FTLYMWWALS IAIAMVGTVF FIAPRWARLR SKAGIQSPTE YLATRYNLST QQVMAWSGVI IKIFDVGAKW AAIGILLNAF TGLPIATGIL TAGVVSMVYI TMGGLWADVV NDLASFLIQF TAGIIMMVMV LIQLGDGLNG IFTMWDRLPA AHGQLYNGPY TPAFAISFTV ICFFSFSGGT WHLATRFISS PSGTEARKAA TLSMLMYLIW PLILFFPMFA APIFIKDLAD PTQSYAMMAI KFLPHGLVGL LLASMFGNTL AMTAADANTI SAVITRDIMP VLYRKMSTFN QKKMLVIARV TTFLFILTTL IIAFQSKSFG GVFGLIITWF SALVGPTAIP MILGLLPAFK HSDSRAALLS IFGGLITFAV MKSFMTVSLT AELASPIVTS MIIYIGCGLF LRSKVKPEVE ALLASLKED
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