| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0346 |
|---|
| Symbol | |
|---|
| ID | 8251431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 407447 |
|---|
| End bp | 408262 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644933994 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090632 |
|---|
| Protein GI | 255530260 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAAGCTTAAG AATCGAAAGC GCTCCAAGAT CGCTTTCGAT AAAGTCAACT
TTGCTGCTTA TGCTGGCTAT TGCTTCATCT GTGATATCTT GTAAAAAGGA GAAAGACGCA
GGTGAAGAGC AGATAAAGGC GGCAACAAGT ATACGCCTTG TACACAGTTC ATTTTTAACC
AGTACTTCTA CTGCCGATCT TTTTGTAGAT GATGTTAAAC TGAATAGTGG TGGCGCCATT
ACCTTTTCCG GGGCATCTGC TTATTTCCCG GCAACGGCCG GATCCAGGAA AATTGTAGTA
AAAAATGCGG CAGGAGTTTC GCTGGCAGAT ACAGTATTAA CGATTTCAGA TGGACGGCAA
TATTCTCTTT TCCTAAAAGA CCGTTCCTGG GCTGATGCAG TTACCCAAAT CGTATCTCCC
CTTAAAAGTG GATTAATTCC GGTTATTGAC AACAATACCG GTATTCCTGC CAAGGGAAAA
GCAAAGATCC GGTTTGTGAA CATGAGTTCG CAGCCATTAA ATTCGCTGGC TGCGCAAATT
ACCTTTTCCA GGTTAGATAA AGTGGGAAGC ACAACAGTAT CTACAACCCT CACTCAAACT
CTTGGGGCTG ATGCGCTAAC CTTTAGTTCC GATTATACTA CAGAAGAGGC CGGAGAGATT
ACGATTAGGG CATTAGGCGC CAACAGTAAT ACTGTCGACT TAACAACAAC ATTGGAAGCA
GATAAGCTAT ATACTTTCTA TGTGGTGTCT ACACAATATA CCGTGAAGAC CCCCACTAAG
TCGCCCATAT CATTAATTGT AGTGCAGAAC AAATAA
|
|---|
| Protein sequence | MKKLSLRIES APRSLSIKST LLLMLAIASS VISCKKEKDA GEEQIKAATS IRLVHSSFLT
STSTADLFVD DVKLNSGGAI TFSGASAYFP ATAGSRKIVV KNAAGVSLAD TVLTISDGRQ
YSLFLKDRSW ADAVTQIVSP LKSGLIPVID NNTGIPAKGK AKIRFVNMSS QPLNSLAAQI
TFSRLDKVGS TTVSTTLTQT LGADALTFSS DYTTEEAGEI TIRALGANSN TVDLTTTLEA
DKLYTFYVVS TQYTVKTPTK SPISLIVVQN K
|
|---|
| |