| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0344 |
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| Symbol | |
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| ID | 8251429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 404578 |
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| End bp | 406416 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644933992 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003090630 |
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| Protein GI | 255530258 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA AATATTATTT ATTAACCTTA CTTATTTTAG TAAGCATAAG CTCATGCAAA
AAGTTTCTTG ACGGCCCGCA GCCAGAGGAC AGTCTTGCCC CCGAGACCTA TTATAACACG
GCAGCACAGT TAGATTTTGC ACTGAGAAGC GTATATGACA TTCTTCAGAG TCCAGAAATA
TACAGAACCA AAATTCACTA TTTGAAAGGG TTTGAAGCTG ATGAAGGCTA TGCCAGGGCA
AGCAATTTTA ATATTTATCT CAACAGTAAT ACACATACGG CCTCTACGGC CGATGCATTT
GCTTATTGGA GAGATCTGTA TAAAGGAATT GCCCGCGCAA ATGTATTGTT GGCCAATGTA
GATAAAAATA CAGGAATCCC TCAGACTTTG AGAGACCAGA TCAGGGGAGA GGCTACTTTT
TTACGAGGCT ATTATTATTT TATGCTGGTG CAAAGCTATG GCGGAGTACC TCTGGTTACC
GAGCCAACAA CTTCCATTGT CAATACAGAT CTGGCAAAAT CAACCGATGT AGAAATCTAT
GCACAGATTC TGAAAGATAT GGTTGCTGCA GAAGCGTTGG TTCCTAAAAT TACAACGTTG
GGCTTCAATG GAAGGATCAG CAAGTCCGCT GTTCGCGGTA TACTGGCCAG AGTTTGTTTA
TCAATGGCAG GAAATCCTAT CAAAGATGTT TCCAAATATG AGGATGCAAG AAAATGGGCA
AAAATGGTAA TGGATGATGG GGAGGCGGGC CATCAGCTCA ATCCTGTGTA TTCGGACATT
TTTATTAAAG TAGCCCAGGA CAAATATGAT ATAAAAGAAA GCCTTTGGGA AGTAGAATTT
TCGGGTAATG GCACAGGTAC CTTTGGTGGA GATGCAGGAC AGGTTGGATA TAATGCCGGA
GCTGTGCAAC CGGCAGCTCC GGCAACAGTA GGTGCTGCCC CGGGTTACAT CTGGACAACT
GCAAAAATGT ATAATTTATA CCAACCTGGA GACGTACGTA GAGGATGGAA TATCATGAAT
TATAGTTTTG TAGGTACAAC TGATGTTAAA TCTTTTAGAG CTGCGCCTGC AAATCAGGCG
GCTATTTATA GCTTGCCGAT AGCAAAGTGG AGAAGGGAAT ACGAATTAGT TTCACCTAAA
AATGCAGCTT TAACACCTAT TAACTTTGCT ATTTTGCGTT ATTCTGATGT ACTCTTGATG
TTTGCAGAAG CCGAGAATGA GATAAGTGGC CCTACACAAG CTGCAAAGGA TGCATTAAAT
CTGGTTAGGC GCCGGGCATA TGCAATTGGT GGTATTAAAG CATTTACCAT AACCAATGGT
GGAACTGGTT ATACCACCGC TCCTGTGGTG ACCATTACAG GCGGGGGAGG AACCGGAGCC
GTAGCTACAG CTGTTGTTGC TGGCGGTACG GTAACTGGGA TCAACTTAAC GCCAAATGCG
GTAACAGGGT TCAATTATGG TACTTATACA TCGGCACCTA CAATTGCCAT TGCCGCTCCT
CCTGCGGGTG GAACAACTGC AACTGCAACC AGTAGTTTGT ATATGAATGC TGACGCTGAT
ATATCTCCAA CGATAAGCAA GGACGATTTT CGCCTATTTA TCCGCGACGA AAGGCCAAGG
GAGTTATGCT ATGAGGCATT ACGCAAATTT GATCTCATAC GATGGGGAAT ATATGTGGAA
AGTATGCAGG GGATTGCGAA TCAGGCGACA TTGGACGGAC TTACCTCACA CATGATAGCC
TGGTTCCGTG CAACTAGCGA AAAACATCTT CTTTTCCCAA TACCTGGTCA GGAACTCATC
AACAACAAAT TGTTAGTGCA AAATCCAGGA TGGAATTAA
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| Protein sequence | MKKKYYLLTL LILVSISSCK KFLDGPQPED SLAPETYYNT AAQLDFALRS VYDILQSPEI
YRTKIHYLKG FEADEGYARA SNFNIYLNSN THTASTADAF AYWRDLYKGI ARANVLLANV
DKNTGIPQTL RDQIRGEATF LRGYYYFMLV QSYGGVPLVT EPTTSIVNTD LAKSTDVEIY
AQILKDMVAA EALVPKITTL GFNGRISKSA VRGILARVCL SMAGNPIKDV SKYEDARKWA
KMVMDDGEAG HQLNPVYSDI FIKVAQDKYD IKESLWEVEF SGNGTGTFGG DAGQVGYNAG
AVQPAAPATV GAAPGYIWTT AKMYNLYQPG DVRRGWNIMN YSFVGTTDVK SFRAAPANQA
AIYSLPIAKW RREYELVSPK NAALTPINFA ILRYSDVLLM FAEAENEISG PTQAAKDALN
LVRRRAYAIG GIKAFTITNG GTGYTTAPVV TITGGGGTGA VATAVVAGGT VTGINLTPNA
VTGFNYGTYT SAPTIAIAAP PAGGTTATAT SSLYMNADAD ISPTISKDDF RLFIRDERPR
ELCYEALRKF DLIRWGIYVE SMQGIANQAT LDGLTSHMIA WFRATSEKHL LFPIPGQELI
NNKLLVQNPG WN
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