Gene Phep_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0342 
Symbol 
ID8251427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp400029 
End bp401174 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content46% 
IMG OID644933990 
ProductDipeptidyl aminopeptidase/acylaminoacyl-peptidase 
Protein accessionYP_003090628 
Protein GI255530256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TTAATTTTAC TAAAAAACTA TTTGCAGCGG TGCCTTTACT GTTCTTTTTT 
GCAGGGGCTG CACTTGCTAT AGCTGTCCCG ATAGCATCAT CAGGCCCGGA GCTCCTGGTT
TACGTTAATA GATCCGGTCA GAAAAAGCCT GTCAGTACCA AGGCCGAATG GCAGATCAAG
CGACAGCAAA TCCTTGAGCG TATGCAGCAG GTAATGGGTA AATTGCCTGG ACGTAAAGGT
TTGCCTGCAA TGGATATCCA AATTACAGAT AGTCTTAAAG AAGATGGTTT TACCCGTTAT
ACAATTAATT TTACTGTTGC CGAAAACGAA ATTTTACCTG CCGACCTATA CATTCCCCAT
CAAAGCGGGA AACCTAAGCG GCTGCCCGCT ATGCTGGCGC TGCATGGAAC CAGTGCATTA
GGAAAAAGAT CCATTGGCGG GGAAAGTCCG CTGGCCAACA GGGCTTATGC CAAAGAACTG
GCCATGCGGG GTTATGTGGT AATTGCGCCC GACTATCCGA GTTTTGGCGA CCTGAAAGAC
TATGATTTTG AAAAGGACAG GTATGAATCC GGTTCCATGA AAGCCATATT TAACCATATG
CGCTGTGTTG ACCTGCTGCA AGCCAGAAAA GACGTAGACC CCGAACGGAT CGGGGTGATC
GGGCATTCGC TCGGCGGGCA CAACGCCATT TTTGCAGGTG CCTTTGATAC CCGCATCAAA
GTAGTGGTAT CCAGCTGTGG CTGGACCCTT TTTGGCAATT ATAACGCAGG CAACGAAGTA
AGCCAAAAAC ATGGTGGCCG GTTAGGCCCC TGGGCACAAA TGCGTTATAT GCCCCTGGTA
AGAGATAAAT ATCAGCTGGA TGCAGCGCAG ATGCCCTTTG ATTTTGACGA AGCAATTGCA
AGCCTGGCCC CAAGGCCTTT CTTCTCCAAT TCGCCAAAAA GTGACGCCAA TTTTGATGTA
AAGGGTGTAA AAGAAGGAAT TTTAAATGTA ACTAAGGTAT ATAAATTTTT AAATGCTGAT
GATAAGCTCC AGGTAGATTA CCCTGATGCA GGGCACGATT TCCCTCCGGA AGTCAGGCTA
AACGCTTACG CATTTATTGA CAAGGAACTA AACCATACAA GTATTCACAA AAAATTATTG
TTTTAA
 
Protein sequence
MKIINFTKKL FAAVPLLFFF AGAALAIAVP IASSGPELLV YVNRSGQKKP VSTKAEWQIK 
RQQILERMQQ VMGKLPGRKG LPAMDIQITD SLKEDGFTRY TINFTVAENE ILPADLYIPH
QSGKPKRLPA MLALHGTSAL GKRSIGGESP LANRAYAKEL AMRGYVVIAP DYPSFGDLKD
YDFEKDRYES GSMKAIFNHM RCVDLLQARK DVDPERIGVI GHSLGGHNAI FAGAFDTRIK
VVVSSCGWTL FGNYNAGNEV SQKHGGRLGP WAQMRYMPLV RDKYQLDAAQ MPFDFDEAIA
SLAPRPFFSN SPKSDANFDV KGVKEGILNV TKVYKFLNAD DKLQVDYPDA GHDFPPEVRL
NAYAFIDKEL NHTSIHKKLL F