Gene Phep_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0329 
Symbol 
ID8251414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp380264 
End bp381889 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content46% 
IMG OID644933977 
Producthypothetical protein 
Protein accessionYP_003090615 
Protein GI255530243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATCCT TAAAATTTAA GAAAATGAAA GAAATATTGA AACATTATAA ATCCCCGGTG 
ATGGTTGCAT TGTTGCTCTT TATCAGTGCG TTTATTGGCT GCACAGATAA GTTTGATGAA
TTGAACACAC CCGAAAATCA ATTACCGGAA GAAGAGATTA ATTCTGCAAC GGTTGGACAG
GCCTTTGGTT ATGCACAATA TTACGGGCTG GGTGCTACTT ATGTTCAGGT GCAGGAAAAC
CTGCATGCCC ATCTGTTTGC CCAATATTTT ACAACCAATG TAGCTACCTT CAGTACGGAA
CGTTATGTAC CTAACGGTAC CTGGGTAGAT CTTTTCTGGA AAGAATTTTA TACCAAGCCG
GCATTAATGC AGTTTACCAC AGAACAGGTA ACTAAGGCCA ACAATATGGT ACTGGCCAAT
GCCATAGCAA AAGTTTGGCG TGTAGTGATC TACCATCGCA TGACCGATTA TTTCGGGCCG
GTTATTTATT CAAAATTTGG CAACCAGCAA ACCAGTGTGG CCTTCGATTC GCAAAAGGAC
ATCTACTATG ACTTTTTTAA AACACTGGAC GAAGCCGTTG AAGTATTTAA ACAAAATCCC
TCGGGCAATG CATTTGGTAC TTACGACCAG GTTTACGCCG GCAGTGCTGC TAAATGGTTA
AAATTTGCCG GTTCTTTGCG GTTAAGGCTG GCCATGCGCC TGGCCTATGC AGACGGGCCC
AAAGCGAAAG CAGAAGCTGA AAAAGCAATT GCTGACGGTG TTATCTTAAC CAATGCCGAA
AATGCAGGGG TATTATCCAC CCTTAACAGC ACCAATATCC TGTCACGCAT TACCTATCTT
GTAAATGATT TCCGTGCAAA TAGCAGCATG CTGAGTGTGT TAAAAGGCTA TAATGATCCG
CGTTTAAGTA TTTATTATTC TCCCGCCGCT ACCGGCGGAC AATATGCCGG GTTGCGCAAT
GGGCTGGCTG CTGCTGACAG GGGTGCTGTT GTAGCACCAA CTACTTCATT TGTAGGCCCG
CAATGGATTG GTAATCCGCC AAGGCCGGGA ACGGTAAACC CTACACTTGT ACTTACGGCA
TCCGAAGTTG CATTTTTGCG TGCGGAAGGT GCTTTAAGGA ACTGGAACAT GGGCACGGGT
ACAGCCCAGA GCTTTTACAA TTCAGGGATC AGTCTTTCCC TTACACAAAA TGTAACCGGT
ATCACCAATA CGCAGATTAC GGCTTATCAA AATACCCTTA CCACACCAGT ACCCCTGGCA
GATAAATGGA ATTCCCCGGC AATGAGCAAT ATTCCGGTAT TGTACAACCT GGCTGGAAGT
TTTGAACAGC AACTGGAGCA GATCATTACA CAAAAGTGGC TGGCCATTTA TCCCGACGGT
TATGAGGCAT GGGCAGAACG CAGGCGCACA GGCTATCCAA GGGGTTATGC ACTCATCGGA
TCAGATAATC CCGACCTGTC GGCCACAGAT CTGGCCAGAA GGGTAATTTA TGCACCCTCA
GAAGTTACGA CCAACAGGGA TGCTTACCAG GCTGCCCTGG GCTTACTGGG TGGGGCCGAC
AATATGAAAA CAAGGGTATG GTGGGATCAG AAACCATTAT CGGCTTATCC AACACCAACA
AATTAA
 
Protein sequence
MLSLKFKKMK EILKHYKSPV MVALLLFISA FIGCTDKFDE LNTPENQLPE EEINSATVGQ 
AFGYAQYYGL GATYVQVQEN LHAHLFAQYF TTNVATFSTE RYVPNGTWVD LFWKEFYTKP
ALMQFTTEQV TKANNMVLAN AIAKVWRVVI YHRMTDYFGP VIYSKFGNQQ TSVAFDSQKD
IYYDFFKTLD EAVEVFKQNP SGNAFGTYDQ VYAGSAAKWL KFAGSLRLRL AMRLAYADGP
KAKAEAEKAI ADGVILTNAE NAGVLSTLNS TNILSRITYL VNDFRANSSM LSVLKGYNDP
RLSIYYSPAA TGGQYAGLRN GLAAADRGAV VAPTTSFVGP QWIGNPPRPG TVNPTLVLTA
SEVAFLRAEG ALRNWNMGTG TAQSFYNSGI SLSLTQNVTG ITNTQITAYQ NTLTTPVPLA
DKWNSPAMSN IPVLYNLAGS FEQQLEQIIT QKWLAIYPDG YEAWAERRRT GYPRGYALIG
SDNPDLSATD LARRVIYAPS EVTTNRDAYQ AALGLLGGAD NMKTRVWWDQ KPLSAYPTPT
N