| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0328 |
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| Symbol | |
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| ID | 8251413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 376875 |
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| End bp | 380258 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933976 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003090614 |
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| Protein GI | 255530242 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTT ATCTATTACA CTTATCGGGT GAAAGGTTGC CCGTATACCA TAAATTTCTT
TTAGTGATGA AACTTACAAT GATTTTACTT CTGGCCGCAA TAATGCATGT AAACGCTACC
GGTTATGCTC AAAAAATCAC TTTGCTAAAA AAAGATGCAC CACTTGTACA GGTACTGAAG
GCCATCAGGC AGCAGAGCGG CTATAACTTT GTATATAATC AGAAAAGTTT AAAGATTGCG
AAGAACGTTA ATATAAATGT AACAGACATT GATATTGAAG AAGCGCTTAA ATTAAGTTTT
GCCAACCAGC CCTTTACTTA CGAAGTACTG ATGAACACGG TAATTATTAA GCCGCTTAAA
AGGGAAAGTC TGGTCATAGC CGATATCAGG ATAACGGGAA CGGTTACCGA TGCAAACGGA
GGGCCTTTGC CTGGTGTAAG TATCAAAGTA AAAGGAAGTA CCGCAGGTGT TTCGACCGAC
CCTTCGGGTA AATATCAGCT CAATGCTCCG GCAAGTGGAA CGCTTATATT CTCTTTTGTT
GGGTTCATTA CAAAGGAAAT TGCTATAAAT AACCAGAGTA CCATCAATGT GAAGATGGAA
GAAAGTTCGG GTGAATTGAC GGAAGTGGTG GTTACTGCCC TGGGATTGAC CCGTCAGAAA
AAAACACTCA CTTACAGTAC CCAGAGTGTA AGTACGAAAG AACTTTCGCA AAGCCGGGAC
CTGAATGTGG TGAATGCCCT GCAGGGTAAG GTTGCCGGAT TAAACATCGG ATCGGGCTCC
AGCGGGGTAG GTGCTGCAGC CAGGGTGATC CTGAGGGGTA ACCGATCTAT AAATGGCAAT
AGTCAGCCCC TGTATGTTAT TGACGGGGTA CCGGTGCGGG GGAACCCGGC CGACCTTAAC
CCGGACAACA TTGCAGCCAT TAACGTGCTT AAAGGTGCAA ACGCCGCAGC ATTATATGGT
AGCGCGGGAC AAAATGGAGT AATTATTATA GAGACCAAAA AGGGCAGGCA GGGTGAAAAG
TCTGTTGATA TTAGCCTGAA CGCTACCTAT ATGGGCCAGG AACCTATCCA GTCAATTCCT
TTTCAATATC AGTACGGACA GGGGGCGGGC GGCATTTACA ACCGTTCGTC TGAGGAATCC
TGGGGCCCTG CGCTTGATGG AAAAATGGTA GCTACCTGGT CGCAAGACCC GGCAAAGGCT
GGCACTACTT ATCCTTTTCT TGGGCAGAAA AATGTAAGGG AAGGCATTTT CCAGACCGGT
CATAATTCGG CAACCAATCT ATCTGTGGCC ACTTCGGGCG AAAAAACACA GACTGCTTTT
AACTATACTT ATACGGATGC TACAGGCATT ATTCCGAACA ATGCTTTGCA GCGGCATAAC
CTAACAGTTA GGATGACCAA TCAGCTGTCA AAAAGATTAA GTCTGGACAG CAAGCTTGAT
TATGCAAAAC AAAATATTGA CAACAGACTG GATGAAGGGG AGTCGAGCTA CAACCCCATC
CGTCAGATTT ATACCATGCC CCCAAATATA CGACAGGAGG ACGTTGAAGA TTTTGAATAT
GTTGATCCTT CTCTGGGTGT TACCAAACAG GATTACTGGG CACCTGGATC GGTTACCAGC
GCCAACCCTT ACTGGGCCTT ATACCGCAAT TTAAGATACA ATAAATCGGA TAGGGTAATT
GCGCTGACCT CGCTTTCCTA TCTTTTTACC GATGACCTTA AGCTGATGCT TAGGGGGTCT
TATGATGGTG AATCTGTAGG TAATGAAGAG AAATCCTATT ACGGTACCTA CCGTGACCCG
CTGGGGCGCT ATGCTTTAGG TGCAGGAAAT TCACAGCAGG CTATCGGTGA TTTTCTGCTC
AGTTATACAA AAAAATTCAG TGCCGACTGG TCGGTACAGG CTAATTTTGG CGGCGAGATC
AGAAATAACA AAAGCAGTTC AGTTACCGCT TCAACAGGAG CGGGCATGAA TGTTCCCAAC
CTGTTTGCGC TGAGTAACAC CAGTTTGCCT ACTGCCGTTA ACACGTTAAG TAAATTTGAA
ACGCAATCGC TCTATACCAA TGCACAATTT GGCTGGAAAG ATGTTTTATT TTTAGATGTT
AGTGCACGTA ACGACTGGAA TTCCACACTT CCGGCAAATA ACAGGTCTTA CTTCTATCCT
TCGGCAGGTG TAAGTGCCAT TATTTCCGAA ATGGTAAAAT TGCCCCAGGC CATTTCTTAC
CTGAAGTTAA GAGGGTCCTG GGCACAGGTA GGTAATGGGG CACAACCTTA TCAGTTGCAA
CGTTATGGAT CCGGACTGGC AGGTGGTCCG CTGGGTTATA TCCTGTTGAA TTCTGTATTG
CCAAATACCG AGCTTAAGCC TGAAAGGACC ACTTCAACCG AGATTGGCTT GGAAATGAGC
ATGTTTAGCA GCAGGATTGG CCTGGACCTT ACTTTGTATA AAACCAATAC AAATGATCAG
CTGTTCCCGC AGGCCTTACC TGTAGGCTCA GGCGCGGCCA GCTTTTTTAC CAACGGTGGT
GATGTACAAA ATAAAGGTAT AGAAGTCATT TTAAATACAA CGCCTGTAAA AACCGGGAAT
TTTACCTGGA ACCTGAACTT TAATTATGCG GTGAACGAAA ATATTGTAAA GAAATTATCA
AAAGACCTTC CCAGATTGGT TGTTGGCAGC GACTCTTACA TGCGTGAATT TGTTTTAGAG
GAAGGAAAAC CTTTTGGATT GATCTATGGC AAGGGTTATC TGCGCAATGC TCAGGGAAAT
GTACTGGTTG GTACCAACGG CCTGCCGCAG TTTACCGCAG GACGAACGGT ATTACTGGGT
AATATCAATC CGAAATGGAC CGGCGGACTG TCGACTTCCC TGTCTTATAA AAACTGGACT
GCCAATTTTG TGATCTCCCA TAAACAGGGC GGAGTGGTAG CTTCATTTAC AGATGCCATA
TTGTATGGCA ACGGACTTGT TGAAGAAACA TTACAGGGCC GTGAAGGCGG ACTGATCTTC
GGGCAGAATA TTTTTACGGG CATTACTGCT GTAAAAGCAG CCGATGGTAC ACCCAATGAC
ATTAAGGTAA ACGCAGAGAC CTTATGGAAA GGAATGGGAT CGAGAACTGC ACCTGTGGGA
GAGGTTTTTA CTAGAAGTGC CACCAATACC CGTTTAAGGG AAATGAGCAT TGGTTACAAG
CTGCCGCAAT CTTTATTTAA ACGTCTGCCA TTTTCTGCAG TAGAAATTTC TGTAGTAGGC
CGTAACCTTT TCTTTTTATA CAGAGAGGAT TCAAATATAG ATCCTGATTT TACTCAGGGC
ATAGAAACCA TCTCTGAAGG CTTCCAATCG TTCGCGCCAC CTACTACACG TTCCTTTGGT
GCAAACCTGA GAATTAATTT TTAA
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| Protein sequence | MKFYLLHLSG ERLPVYHKFL LVMKLTMILL LAAIMHVNAT GYAQKITLLK KDAPLVQVLK
AIRQQSGYNF VYNQKSLKIA KNVNINVTDI DIEEALKLSF ANQPFTYEVL MNTVIIKPLK
RESLVIADIR ITGTVTDANG GPLPGVSIKV KGSTAGVSTD PSGKYQLNAP ASGTLIFSFV
GFITKEIAIN NQSTINVKME ESSGELTEVV VTALGLTRQK KTLTYSTQSV STKELSQSRD
LNVVNALQGK VAGLNIGSGS SGVGAAARVI LRGNRSINGN SQPLYVIDGV PVRGNPADLN
PDNIAAINVL KGANAAALYG SAGQNGVIII ETKKGRQGEK SVDISLNATY MGQEPIQSIP
FQYQYGQGAG GIYNRSSEES WGPALDGKMV ATWSQDPAKA GTTYPFLGQK NVREGIFQTG
HNSATNLSVA TSGEKTQTAF NYTYTDATGI IPNNALQRHN LTVRMTNQLS KRLSLDSKLD
YAKQNIDNRL DEGESSYNPI RQIYTMPPNI RQEDVEDFEY VDPSLGVTKQ DYWAPGSVTS
ANPYWALYRN LRYNKSDRVI ALTSLSYLFT DDLKLMLRGS YDGESVGNEE KSYYGTYRDP
LGRYALGAGN SQQAIGDFLL SYTKKFSADW SVQANFGGEI RNNKSSSVTA STGAGMNVPN
LFALSNTSLP TAVNTLSKFE TQSLYTNAQF GWKDVLFLDV SARNDWNSTL PANNRSYFYP
SAGVSAIISE MVKLPQAISY LKLRGSWAQV GNGAQPYQLQ RYGSGLAGGP LGYILLNSVL
PNTELKPERT TSTEIGLEMS MFSSRIGLDL TLYKTNTNDQ LFPQALPVGS GAASFFTNGG
DVQNKGIEVI LNTTPVKTGN FTWNLNFNYA VNENIVKKLS KDLPRLVVGS DSYMREFVLE
EGKPFGLIYG KGYLRNAQGN VLVGTNGLPQ FTAGRTVLLG NINPKWTGGL STSLSYKNWT
ANFVISHKQG GVVASFTDAI LYGNGLVEET LQGREGGLIF GQNIFTGITA VKAADGTPND
IKVNAETLWK GMGSRTAPVG EVFTRSATNT RLREMSIGYK LPQSLFKRLP FSAVEISVVG
RNLFFLYRED SNIDPDFTQG IETISEGFQS FAPPTTRSFG ANLRINF
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