Gene Phep_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0327 
Symbol 
ID8251412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp375594 
End bp376760 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content43% 
IMG OID644933975 
ProductFecR protein 
Protein accessionYP_003090613 
Protein GI255530241 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA CCGAATTTGA ACATTTAGCG AAAGAATATC TGGAGGGTAG TATTAGCCCA 
GGAGACGAAA AACGTTTGCT TGCTTATTAT GATGCCATAC AGCAAAAGGA TATGGACTGG
GACGAGGAAG AAATGGGTCC GCAGCAACAG CTGAAAATGG AACTGTACCA GAAAGTGCTG
GAGGATATTG CCCGACATGA GGAATTAAAG CCTGCAGGCA AACCAGGCCT TGTCCGGTTG
AACTGGATTG CTGTAGCTGC CGTACTTGCG GTGGCATCGA TGACCTTCTT TTTTTATGTT
AAAAAAGCAT CATTGCCTCC CGTTAAACAT GTTAGTGCTG GTATAGAGGA TGTATTGCCA
GGAGGGAACA AGGCCGTTCT GACACTGGCC GATGGCTCTG AAGTAAGCCT TGACGATACC
GAAGATGGCG TGGTAACCAC CCAGGGGAAT ATCATTGTAG ATAAAAATAA GGATGGACAA
CTGATTTATC GTGTCCGATC AGCAGGAGGA AACAGCGCCG AGGCGAAACC GGTTTACAAT
ACCATCCGGA CACCTCATGG TGGCCAATAT CAGCTGGTGC TATCAGACCA GACAAAAGTA
TGGCTCAATG CAGGTTCGTC TATTAAGTTC CCTACGGTCT TTATAGGTAA TGAAAGGTGT
GTAACGGTTA AAGGTGAAGC ATATTTTGAA GTTGCCAAAG ATAAACGAAG GCCTTTCAAA
GTGTTTAGTG CGCAACAGCA GATAGAAGTA TTGGGCACCC ATTTTAATGT GAATGCTTAT
GAAGATGAGG CAGAGGTAAA AACTACCTTG CTTGAAGGGG CTGTAAAGAT AGTTTATGGC
AATTTAAGTC GTGTGATTAA ACCCGGACAG CAGGCCCGTT TATTGGAAGA AACCGGCAAA
ATGGAGTTGG CCGAGGTGGA CATAGAAGAG GCCGTTTCGT GGAAAAACGG ATATTTTATG
TTCGACAATG AAGACATCCA TAGCGTTATG CGCAAAATAT CGCGCTGGTA TGATGTAGAG
GTAGTCTTTT TAAATAATCA GATCAGCGAA AGGTTTGGGG GTACGGTTTC AAAATTCGAA
AACGTATCGC AGGTGCTTAA AATATTAGAA GTAACAGGAA CTATTCATTT TAAAATTGAT
GGAAGGAGAA TAATCGTTAT GCAATAA
 
Protein sequence
MNRTEFEHLA KEYLEGSISP GDEKRLLAYY DAIQQKDMDW DEEEMGPQQQ LKMELYQKVL 
EDIARHEELK PAGKPGLVRL NWIAVAAVLA VASMTFFFYV KKASLPPVKH VSAGIEDVLP
GGNKAVLTLA DGSEVSLDDT EDGVVTTQGN IIVDKNKDGQ LIYRVRSAGG NSAEAKPVYN
TIRTPHGGQY QLVLSDQTKV WLNAGSSIKF PTVFIGNERC VTVKGEAYFE VAKDKRRPFK
VFSAQQQIEV LGTHFNVNAY EDEAEVKTTL LEGAVKIVYG NLSRVIKPGQ QARLLEETGK
MELAEVDIEE AVSWKNGYFM FDNEDIHSVM RKISRWYDVE VVFLNNQISE RFGGTVSKFE
NVSQVLKILE VTGTIHFKID GRRIIVMQ