Gene Phep_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0317 
Symbol 
ID8251402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp369169 
End bp369630 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID644933965 
Productprotein of unknown function DUF1486 
Protein accessionYP_003090603 
Protein GI255530231 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.478711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC AGAAATCAAA AGAAGAACTG AACAAAGAAG TAGTTGTACG TTGGTTTACA 
CACTTCTGGG GAGAAACAGT TGATCTTTCA ATTGTTGATG AAATTGCTGC ACCAGATATG
CTGTTAAAAT ATTCATTGCA TGAGCCACGT AACGGTCGTG AAGATATTAA GGCGTTCATG
ACGGACTTCC GTGCTGCATT CCCTGACTTG AATTTTTGGG GTACTGCAGA CCTGATTGCT
GAAGGAGACT ATGTGGTTGG TCAATGGGAA GGTGGCGGAA CCCATACCGG TATTGCCTTT
GGCGATTTCC TTGCAGGTTC ACTGCCCGAA GCAACCGGAA GGAAAATGCA CTTCACAGGA
ACAACGGTAC TGAAAGTGGT AGACGGAAAA ATCGTTGAAG AAATTGGTCT TGATGATGGT
GTTACTGCTT TAACTCAATT GGGTTTGATG AAAACTGTCT AA
 
Protein sequence
MENQKSKEEL NKEVVVRWFT HFWGETVDLS IVDEIAAPDM LLKYSLHEPR NGREDIKAFM 
TDFRAAFPDL NFWGTADLIA EGDYVVGQWE GGGTHTGIAF GDFLAGSLPE ATGRKMHFTG
TTVLKVVDGK IVEEIGLDDG VTALTQLGLM KTV