Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0316 |
Symbol | |
ID | 8251401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 368348 |
End bp | 369049 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644933964 |
Product | hypothetical protein |
Protein accession | YP_003090602 |
Protein GI | 255530230 |
COG category | [S] Function unknown |
COG ID | [COG3506] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.385756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACAA TATTTTCTAG ACACTTTGCG GTCATTATAG CTTTTACCGC AGTATGTTCT TTGGCGCAGT TTTCCTTTGG ACAAGCCCCG GGGCTCAATT TGAAAAATCA ACCAAACATT GCTTTTAGGC AGGACACTAC TATGTATTGG GAAAACAAAC CGGAAACCTA TACAGTCAAG GGAAAATCGG TTACCATGCG TACCAATAGT GCAAAATACC TTTGGGGAGA TAGTCACGAA TTTGATTTTG ACTTTCCATA TTCTCATTCC TACTACCGGA ATATAGCTGG CAATTTCACG GCACAGACAA CAGTAATGCT AACAGACGAC TGGAAAAACG GGAACGCTGG CTTGCTTATT AAGTTATCGC AATCGAATTG GATAAAGCTG TACATAATCA AAGAAACGAA TGTGCTGCGC CTCAATACCG TTTATGCCAG TGATGCAACC CATATAGATT ATTCTACTTC TCTGCTCCAT TCCAACGATA ATAAGATATG GTTACAGGTA AGCTGTAACA ACGGAGTGCT TCGCTTAAAA TGTTCCACCA ACGGACGGGC ATACGAAACG GTCCGTATTT TAAATATGCC AGCAGGTTAT AAGTCTGCAC AGGTAGGCTT AATGGCAGAC TCTCCAATGT CATCAGGCTT CGATGCTTCA TTTGAGAACC TTAGTATTCG CAATATAGCA GAAGATCAAT AA
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Protein sequence | MYTIFSRHFA VIIAFTAVCS LAQFSFGQAP GLNLKNQPNI AFRQDTTMYW ENKPETYTVK GKSVTMRTNS AKYLWGDSHE FDFDFPYSHS YYRNIAGNFT AQTTVMLTDD WKNGNAGLLI KLSQSNWIKL YIIKETNVLR LNTVYASDAT HIDYSTSLLH SNDNKIWLQV SCNNGVLRLK CSTNGRAYET VRILNMPAGY KSAQVGLMAD SPMSSGFDAS FENLSIRNIA EDQ
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