Gene Phep_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0315 
Symbol 
ID8251400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp367891 
End bp368319 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content37% 
IMG OID644933963 
Producthypothetical protein 
Protein accessionYP_003090601 
Protein GI255530229 
COG category[S] Function unknown 
COG ID[COG3826] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.362131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA TAGAACAAAG ATTAAAGACA AAAAAATGGG ATGTAATTCT TGATGAATTG 
AGCAGGAAAG GATTTGCAAT TGTCCCTGAC CTTATCAACG ATAAAGAATG TGCAGAACTG
CTTCATGAAT TTAAAGAAGA ATACCGGTAC AGAAAAACTG TCGTTATGGA ACGTTATCGT
TTTGGCAAAG GTGTGTACAA ATATTTCAAT TATCCGCTGC CTAACATTCT GACGGAATTA
AGAGAGAATT TTTATACTTA TCTCGCCCCT GTTGCCAATA AATGGTTTGA GGTGTTGAAA
ATAAAGACCC GTTATCCTGA AATACATAAA GAGTTTATTA ACCAATGTAA GCAGAACGGG
CAAGAGAAAG CTACCGCATT AATTCTTGGG TATGGTGCAG GTGGATTTCC ATTACTAAGC
CCCGGATAA
 
Protein sequence
MNTIEQRLKT KKWDVILDEL SRKGFAIVPD LINDKECAEL LHEFKEEYRY RKTVVMERYR 
FGKGVYKYFN YPLPNILTEL RENFYTYLAP VANKWFEVLK IKTRYPEIHK EFINQCKQNG
QEKATALILG YGAGGFPLLS PG