| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0313 |
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| Symbol | |
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| ID | 8251398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 365913 |
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| End bp | 366848 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644933961 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003090599 |
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| Protein GI | 255530227 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.593516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0908723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATAAAT CTGAAAATCA ACAAATGAAA GCCCCGGCAA AAGTTTCGTC GATAAGTGCA
TTGCATCAGT TTTTAGGATT AGCGAAACCG TCCAATCCTC TGATAAGCCT GTTTAATTTC
GACGATGTAA TATTGGAACC TGAAACGATT TTGAGTGCAA TTACAACCGA ATTTTATGTA
GTTGCTTTAA AGAAAGATTG TGCGGGAGGA AAATGTAAAT ACGGACAGCA ATATTATGAT
TTTGATGAAG GGATTATGTA CTTTATTGCT CCGCATCAAG TGTTACAATT TGAAGATGTA
TTACTCAATG GTGTAAAAGG TTTTGTTTTG GTGATACACC CTGATTTTTT TCACGGCTAT
CCCTTGGCAT CTGAAATCAG AAACTACGGC TATTTCTCGT ATGTGAGCAA TGAAGCTCTG
CACCTCTCCG AGAAAGAAGA AAAATCCATA ATGCACATTG TAGAAAATAT CAGCAAGGAG
ATAGATGCCA ATATGGATGC TTATACACAA GATCTGTTGG TGTCGAATAT TGATTTGTTG
CTGAAATATT GCGACCGTTT TTATAACCGT CAGTTTTTGA CAAGGAAGAA AGCCAACAAC
GATTTGTTGA CAAAACTGGA AGCCTTACTG GACGGGTATT TTAAAAACGA TGTATTACCT
GATAAAGGCA TTCCTACAGT CAATTTCGTT GCAAGCAAAT TAAATTTAAG CCCCAATTAT
CTTAGTGATA TGCTAAGGGT GAATACAGGG CAGACAACAC AACAACACAT TCAGAACCGT
GTCATCGAAA AAGCAAAAGA ACTGTTATCA ACTACTTCTT TGTCCGTGTC AGAAATAGCC
TATCAGTTAG GTTTTGAACA TTCACAATCT TTTCATCGCC TGTTCAAAAA CAGGACTGCT
GTTTCGCCCC TGGAGTTTAG ACAATCCTTT AACTGA
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| Protein sequence | MYKSENQQMK APAKVSSISA LHQFLGLAKP SNPLISLFNF DDVILEPETI LSAITTEFYV
VALKKDCAGG KCKYGQQYYD FDEGIMYFIA PHQVLQFEDV LLNGVKGFVL VIHPDFFHGY
PLASEIRNYG YFSYVSNEAL HLSEKEEKSI MHIVENISKE IDANMDAYTQ DLLVSNIDLL
LKYCDRFYNR QFLTRKKANN DLLTKLEALL DGYFKNDVLP DKGIPTVNFV ASKLNLSPNY
LSDMLRVNTG QTTQQHIQNR VIEKAKELLS TTSLSVSEIA YQLGFEHSQS FHRLFKNRTA
VSPLEFRQSF N
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