Gene Phep_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0308 
Symbol 
ID8251393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp361194 
End bp362528 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content43% 
IMG OID644933957 
Producthypothetical protein 
Protein accessionYP_003090595 
Protein GI255530223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.472344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0124586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA AAAAAATTTT AACATATATA TTCCTGTTAA CCGCTCTGAT GTACGGTTGT 
AAAAAGGATA ACGATCCGAT TTTAGAGGAT CCTGATACAA GACTTAGTGC CGAACTGGAA
AAAGACCAGG CTTTATTGCT GTCTGCAAAC GATGGCTGGC TGGCCACCAT CTATCCCAAA
GGGGGAAAGG GTTTTTCTTT CTATTTTAAA TTTGCTGCAG ATGGTAAGGT AACCATGCTG
TCAGATTTTA ACACCACTAC CGCAGGAACC TCTGCCGAAA GTAGTTACAG ACTTAAAGCC
TTGCAACGGC CAACGTTGAT TTTTGATGGC TATAACTATA TTCATTTGCC GGCCGACCCA
AATTCAGCAG TTAGTGGCGG TAGCAGCACG GCATTGGGCC TGACTTCTGA TTTTGAGTTT
GCATTTACCG GGCAGGCCGG GGATACAGTC AAATTTGAGG GGACATTTAA TAAGAATTAT
ATGTCTATGG TAAAATTGTC AAATGCCCAG GCACAGACGA TTTTAGCTGG CGGATTAAAA
AAGATGATCG ATGATGCCAA TGCAGCGGTA ACAGGAAAGA TCCTGTTCAT CATGCTGGAT
AATAAGCAAA TCCCTGTGTC ACTTAGTGTT GCCGGCAAAT CCGTTTCTAT TGCCGGACAG
ACCAGTTCTG CCTTTGCTTT CGGTTTGAAT GAACTGACGC TGAAAAACCC ACTTAAATTT
GGATCCTATA GCTTCGATAA AGTTTACTGG GAGCCTACAG ACAAGTATTT TTACTTTTTA
AACGGAAATG CAAAGGTTAA AATCGAGATT TCACCTGCAC CGCTTCCATT GGAAACTACG
CCTGCATTAC ATACCGTTTT GGGTACCCGC TGGACATCTA TGCAAATAAA TGTTGCCAAT
TTATCTGAGC TATCAGCCGA CTTTCTGGCT AAATACAATG CAGCCAATAC GTCCCTGGGT
ACTTTGCCTA CCAATGGTGC ACCAGGAGGA AGATATATAG AATACATCAC CCTGTTGTTT
AACCCTAATG GTACCGTCAC GTTCCAGATC AGGTATAGAA ATCCGGCGTC TCCATCCAGT
TTCTTTAATG CAGATTTTAT TTATAATATG GCGCTGGATG CGAACACAGG AATTGCGAAG
TTTACCCTGG CAGCTACGCC AGCAGGGAAT GCAAGTACCA TCAGAACGTA TGTTACTGCA
TTAACTGATT ATTTTGCAGG TGCTAATTTT AAGATTGCTT ACATCGCAGC AGGTGCTCCT
TCGGGCGCAA CTGTTGGCGG ATTCTTAAAT CAGAACAATC CCGCATCTTT CTTTTATGGG
GTGTTGCAGC AATAA
 
Protein sequence
MKMKKILTYI FLLTALMYGC KKDNDPILED PDTRLSAELE KDQALLLSAN DGWLATIYPK 
GGKGFSFYFK FAADGKVTML SDFNTTTAGT SAESSYRLKA LQRPTLIFDG YNYIHLPADP
NSAVSGGSST ALGLTSDFEF AFTGQAGDTV KFEGTFNKNY MSMVKLSNAQ AQTILAGGLK
KMIDDANAAV TGKILFIMLD NKQIPVSLSV AGKSVSIAGQ TSSAFAFGLN ELTLKNPLKF
GSYSFDKVYW EPTDKYFYFL NGNAKVKIEI SPAPLPLETT PALHTVLGTR WTSMQINVAN
LSELSADFLA KYNAANTSLG TLPTNGAPGG RYIEYITLLF NPNGTVTFQI RYRNPASPSS
FFNADFIYNM ALDANTGIAK FTLAATPAGN ASTIRTYVTA LTDYFAGANF KIAYIAAGAP
SGATVGGFLN QNNPASFFYG VLQQ