| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0307 |
|---|
| Symbol | |
|---|
| ID | 8251392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 359777 |
|---|
| End bp | 361174 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644933956 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090594 |
|---|
| Protein GI | 255530222 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00653437 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT TTATATATAC ACTGGGTATT TTTTCTCTTC TGGGCTTAAC GATAAGCTGT
AAAAAGAGTG AGAACCTGGA TAAGGAAATT GTTGGCCTTG GGGGCGACAC CTGGGTGCAG
GGAGCACTTG ATCAATGGTT GTATACTAAC TTTACGCAGC CTTTTAACAT GTCTGTTAAA
TACAGATGGG ATGGTACGGA ATATGATCCT GCAAAGACGC TAACACCACC AAAAGTTGAA
AGGGTTCAAC CCTTAATGGA AATGGTAAAA GCAGTCTGGA TTGATCCATA TGTATCGGAA
AGTAATATGG ATTTCATCAG AAAATACGGC CCAAAAAACT ATGTGCTGGT AGGGAGTTTA
CAATATAATG TAGGTGGTAC AGTAACTTTA GGGGAAGCAG AAGGAGGGGT AAAAGTAACC
CTGTTTAATG TCAATAACTT CTCAAAAACC AACAGGGAGG TTTCTCAGCG GGTACTTAAA
ACCATCCATC ATGAGTTTAC GCATATTTTA AACCAAACCA TTAGCTATCA GAAAGAATTT
CCGCAGGTTA CACCTGCAGG TTATACTGCC GACTGGAACA ATACTACGCT GGTAAATGCC
AATAATGCGG GATACATTAC CCAGTATTCC CAGGCTTCAC CAAATGAAGA TTTTGCAGAA
ATGACATCAG TTATGCTGAC AGAAGGAAAA TCCTCTTACG ATGCAATTGT AAACAGTATT
GTAGTCCCTA AGCTCGATTC TATTCCCGAT CCGGCCAATC CACCCTTCAT CATTGTCAGG
GAATTACCAA ATACGGCTGC CCAGGCGGCC CTCAGGAAAA AAGAGCAATT TGTAGTTTCT
TATTTCAAAA GCAGTTACGG AATTGAATTC GCCCGTTTGC AAAACAAAGT AAACTATGCT
TTGGCAGCAA ATGCACCTTC TGATTTAGCT ACATTATTCG GTAACCGCAA AAAGTATACT
TCAATTTCTG TCGATCCTGA CAATGTTCCT GGCATGTCGG CAAATTTTAT GTCTACCTGG
GCAACAACTA AAACAGGTCT TGCAGCGGTT GGTGGTCAAG GCAGGGTATT AAATAATTTT
GTGCTGTTTT TTTATCCCAG AGCTGGTGAA CTGGTGTTGC GTATCAACTA TGCCAATTCA
ACCGGTGTAC TGGCCGCAAA CTTTGTGTAT AAGGTAGCTT ATAACGCAAA CAATCAGTTA
ACCCTGACTT ATTTAAGGCG GGATGGAAAT GCTGAGGTGA TTGCACCGGG AGTGGTTGCA
TTAACCAATT ACCTTACTTC AGGTAGTTTC GCGGTCAGCT GGCGTTATGA TGCCAATTTC
CTTGAATTCG GACAGTGGAC AAAAGTTTCA GATCCTACTT CATCGTTTTT CGGGAATTTA
GGTGTAATAA AATATTAG
|
|---|
| Protein sequence | MKNFIYTLGI FSLLGLTISC KKSENLDKEI VGLGGDTWVQ GALDQWLYTN FTQPFNMSVK
YRWDGTEYDP AKTLTPPKVE RVQPLMEMVK AVWIDPYVSE SNMDFIRKYG PKNYVLVGSL
QYNVGGTVTL GEAEGGVKVT LFNVNNFSKT NREVSQRVLK TIHHEFTHIL NQTISYQKEF
PQVTPAGYTA DWNNTTLVNA NNAGYITQYS QASPNEDFAE MTSVMLTEGK SSYDAIVNSI
VVPKLDSIPD PANPPFIIVR ELPNTAAQAA LRKKEQFVVS YFKSSYGIEF ARLQNKVNYA
LAANAPSDLA TLFGNRKKYT SISVDPDNVP GMSANFMSTW ATTKTGLAAV GGQGRVLNNF
VLFFYPRAGE LVLRINYANS TGVLAANFVY KVAYNANNQL TLTYLRRDGN AEVIAPGVVA
LTNYLTSGSF AVSWRYDANF LEFGQWTKVS DPTSSFFGNL GVIKY
|
|---|
| |