Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0302 |
Symbol | |
ID | 8251387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 351891 |
End bp | 352427 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644933951 |
Product | protein of unknown function DUF420 |
Protein accession | YP_003090589 |
Protein GI | 255530217 |
COG category | [S] Function unknown |
COG ID | [COG2322] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00015964 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAGCAA ATAACAATTC AGTTGAACAG AAATATAATA AATGGATCAT TTTGTTATCT ATTGTTATCC CGGTAGCCGT AGCGGTATTG TTCTATGTTA AAATCCCCAA TGCAAGCCCT TTGCCCTTTT TGCCCCCAAT TTATGCGACC ATAAATGGCA TTACCGCGGT ATTGCTGGTG ATGGCCGTAA TGGCGGTTAA GAAGGGAAAA CGGAAACTGC ATGAGAACTT AATGAAGCTT GCCATTGGCT GTTCGTTATT GTTCCTGGTC ATGTATATCG CTTATCACAT GACCACCCCA TCTACAAAGT TTGGCGGAGA AGGTACCATC AAATATGTTT ATTATTTTGT TCTACTGACA CACATACTTT TATCTATTGT CATCATACCC CTGGTGCTGA TCACTTATGT AAGGGCTTTG GCCGAACGTT TTGATAAGCA TAAAAAAATT GCAAAGATCA CTTTTCCACT CTGGTTGTAT GTTGCAGTTA CTGGTGTTGT AGTATACCTG ATGATCTCTC CTTATTATAA TTTTTAG
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Protein sequence | MTANNNSVEQ KYNKWIILLS IVIPVAVAVL FYVKIPNASP LPFLPPIYAT INGITAVLLV MAVMAVKKGK RKLHENLMKL AIGCSLLFLV MYIAYHMTTP STKFGGEGTI KYVYYFVLLT HILLSIVIIP LVLITYVRAL AERFDKHKKI AKITFPLWLY VAVTGVVVYL MISPYYNF
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