Gene Phep_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0300 
Symbol 
ID8251385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp350812 
End bp351171 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content37% 
IMG OID644933949 
Producthypothetical protein 
Protein accessionYP_003090587 
Protein GI255530215 
COG category 
COG ID 
TIGRFAM ID[TIGR02229] caa(3)-type oxidase, subunit IV 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000123486 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCAGAAT TACATAACGA ACACGCACAT AACGAACATG CACACGGGGA GCATGCAGGT 
TTAGACAAAA AGAAAATTTG GCAGGTATTT GGAATTCTGC TGGCCATTAC TGTAATTGAG
TTTATCATTG CCTTATGGGC AATTCCAGGC GGACATATGC CTCAGCATAT CGGTAATTAT
GTTTATATCG CTTTAACTTT ATTAAAGGCC TTTTATATAG TTGCTTATTT TATGCACCTT
AAATACGAGA AGGTTGGGCT TCAGGTTTCA CTGACTGTCG TTTTTATTTT TATCTTTTAC
TTTATTGTAT TGATGCTAAT TGAAGGCGGA TACTTACACC TGCATATGCC CTTGGTTTAA
 
Protein sequence
MSELHNEHAH NEHAHGEHAG LDKKKIWQVF GILLAITVIE FIIALWAIPG GHMPQHIGNY 
VYIALTLLKA FYIVAYFMHL KYEKVGLQVS LTVVFIFIFY FIVLMLIEGG YLHLHMPLV