Gene Phep_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0292 
Symbol 
ID8251377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp342342 
End bp342956 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content40% 
IMG OID644933941 
Producthypothetical protein 
Protein accessionYP_003090579 
Protein GI255530207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0554303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00107443 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAGCTA TGAATAAGAA TAAAGTAGTT TTAGCCTCAT TTTGTATTCT TGCAGGTGCT 
GTTATGTTCA CAGCATGTAA GGATAAAAGA AGTACAGGTT TAGAATACGC CAGAAACATG
TATGATCCGA TTGCGCTTAA TCCGGACCAG CCAGTTTCTA CTACGAATGA CTATTTAAAA
AGTTTTAAAG GTCAGACTGC CCAGACGCCA CCGGCAAATA CTACTCCGGT AGGGTTTGAT
CGGTATGATG ACTACCCGAA TACCAAGGAA GGTTATGAAG CGGCCGGAGC CAATCTGGTT
AATCCTCTTC CTGCGACAGC AGCAAATCTG GAATCAGGTA AACACTATTT CAAAGTATTT
TGTTCTCCAT GTCATGGTGA GCAGGGCGAT GGACAAGGTC ACCTGGTTAA AATTGAAAAG
TTCAATGGTG TTCCTTCTTA TCATGGTGAT GCAGCTTCTT CACGTGGCGG TCTGATGAAA
GATTTAACAG CAGGAAAAAT TTATCATACA ATTGAGTATG GTTTAAATAA TATGGGATCA
CATGCCTCTC AGCTATCTCC TGAAGAAAGG TGGAAAGTAG TGATGTATGT TCAACAATTA
CAAAAAATAC AATAG
 
Protein sequence
MLAMNKNKVV LASFCILAGA VMFTACKDKR STGLEYARNM YDPIALNPDQ PVSTTNDYLK 
SFKGQTAQTP PANTTPVGFD RYDDYPNTKE GYEAAGANLV NPLPATAANL ESGKHYFKVF
CSPCHGEQGD GQGHLVKIEK FNGVPSYHGD AASSRGGLMK DLTAGKIYHT IEYGLNNMGS
HASQLSPEER WKVVMYVQQL QKIQ