Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0292 |
Symbol | |
ID | 8251377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 342342 |
End bp | 342956 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644933941 |
Product | hypothetical protein |
Protein accession | YP_003090579 |
Protein GI | 255530207 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0554303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00107443 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAGCTA TGAATAAGAA TAAAGTAGTT TTAGCCTCAT TTTGTATTCT TGCAGGTGCT GTTATGTTCA CAGCATGTAA GGATAAAAGA AGTACAGGTT TAGAATACGC CAGAAACATG TATGATCCGA TTGCGCTTAA TCCGGACCAG CCAGTTTCTA CTACGAATGA CTATTTAAAA AGTTTTAAAG GTCAGACTGC CCAGACGCCA CCGGCAAATA CTACTCCGGT AGGGTTTGAT CGGTATGATG ACTACCCGAA TACCAAGGAA GGTTATGAAG CGGCCGGAGC CAATCTGGTT AATCCTCTTC CTGCGACAGC AGCAAATCTG GAATCAGGTA AACACTATTT CAAAGTATTT TGTTCTCCAT GTCATGGTGA GCAGGGCGAT GGACAAGGTC ACCTGGTTAA AATTGAAAAG TTCAATGGTG TTCCTTCTTA TCATGGTGAT GCAGCTTCTT CACGTGGCGG TCTGATGAAA GATTTAACAG CAGGAAAAAT TTATCATACA ATTGAGTATG GTTTAAATAA TATGGGATCA CATGCCTCTC AGCTATCTCC TGAAGAAAGG TGGAAAGTAG TGATGTATGT TCAACAATTA CAAAAAATAC AATAG
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Protein sequence | MLAMNKNKVV LASFCILAGA VMFTACKDKR STGLEYARNM YDPIALNPDQ PVSTTNDYLK SFKGQTAQTP PANTTPVGFD RYDDYPNTKE GYEAAGANLV NPLPATAANL ESGKHYFKVF CSPCHGEQGD GQGHLVKIEK FNGVPSYHGD AASSRGGLMK DLTAGKIYHT IEYGLNNMGS HASQLSPEER WKVVMYVQQL QKIQ
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