| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0289 |
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| Symbol | |
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| ID | 8251374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 337231 |
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| End bp | 340311 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644933938 |
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| Product | putative iron-sulfur binding oxidoreductase |
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| Protein accession | YP_003090576 |
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| Protein GI | 255530204 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.120275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0040392 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAGCA ATAAAAAATA CTGGAAAGGC TTAGAAGAGT ATAACAACAC TCCGGATTTT
GTTGAAAACA ACAAAAACGA ATTTGCTGAG CCCCTTCCAA TAGAAGATGT TTTAAATGAA
GCAGGGTTAA GTACAGTAAC TCCACGCCGC GACTTTTTAA AGGCTTTAGG CTTTGGGTTA
GGTGCGGTAA CACTTGCAGC TTGTCAGACC GCCCCTGTTC ATAAGGCAAT TCCTTATGTG
ATTAAACCTG AAGAGGTTGT GCCGGGTATC CCTAACTATT ATGTGTCAAG TTTTAACGGG
CAGCCTGTAC TGGTAAAAAC CAGGGAAGGA AGACCTATTA AAATAGAGGC AAATCCTAAT
GCAGGTGTAT TTAACTGTGG AACTGATGCA CAGGCACAGG CTTCTGTACT GGATCTGTAT
GATGTATCTA AACTAAAATC GCCTTTATTA AAAGAGAACG AAACTACCTG GGCAAAAGTA
GATGAGTTTG TAAAAGGAGA ATTAAATAAA GCACAGGCTT CGGGTAAAAA GATCAGGATT
GTTTCTTCTT CTGTAAACAG TCCGTCTACC AAGGCTGTTA TTGCTGATTT TGCTGCTGCT
TATCCGAATA CGAAACATGT ACAGTACGAT GCAGTTTCTT ATACAGGTAT CATTAAAGCG
AATGAAAGTA CTTTTGGTAA AGCAGTTGTT CCAAAATATA AATTTGATAA AGCTGATCTG
ATCGTAAGTT TTGGGGCAGA CTTTTTAGGT ACCTGGATCA GTGGAGAGGA ATTTACGGCC
CAGTATGTAT CCAACAGGAA CCATACTTCG TTGAAAAACG GTAAAATGTC GCGCCACTTC
CAGTTTGAGG CAGGGATGAG CCTGACAGGT ACCAATGCAG ATACCAGGGT TCCGGTAAAA
TTATCGGAAG AGGGACCTGC ACTGATTACC TTATACAATG CAATTACAGG GAGTAATTTA
GCAGGAGCAG CGCTTCCTAA CAATGTTACT GCCGATAAGG CGCTTAAATT AGTTGCGAAA
GAATTACTGC AAAATAAAGG AAAAGCACTG GTTGTTTCCG GTTCGAATGA TATATCTACC
CAGATTCTGG TAAATGCGAT CAATTCGGCA ATCGGCAGCT ACGGTACCAC TATCGATCTG
GATAATCCGA ATAAGCGTTA TGCAGGTAAT GATGCCGAAT TTGCTGAGTT CATTAATGAA
ATGAACAAGG GCGAGATTGC TGCGGTATTT TTCCTGGACA GCAATCCTGT TTATGATGTA
GCAAATAGCA AAGCGTTTAC TGAGGCTTTG GCTAAGGTTG CTTTAAAAGT ATCTTTCTCT
GACCGTAAAG ATGAGACTTC AACTTTATGT GATGTGATTG CGATCAATCA TAATTACCTG
GAAGCATGGG GTGATGCCAA TATATACGAA GGATACTATT CTATCGTACA GCCTACAATT
AACCCGGTAT TTAACTCGCG CCAGGCAGAA GAAAGCTTGT TAACCTGGTC TGATGCCCCT
GTTAAAGAAT ACTATCAATA TGTACGCAAT AACTGGGAAA AAAACATACT GCCTACTTTT
GGTAAAGGAT GGAAAGAGGT ATTGCAAGCA GGTGTGTTTG CTGCTGCAGA GAAACCTGCA
GGTGCATATA GCGTAGGTTT ATCGCTTGAT GCAGCCGCTG CAGCTATCGT AAATAACAGT
AAGGCACTGG CTAAGAACAA AGTAGAGTTA CAGGTATACG AAAGTATCCC GATGCGTGAC
GGTAAACATG CAAATAATGC ATTTTTACAG GAATTGCCAG ATCCGGTTTC TAAAGTAACC
TGGGACAATT ACATTGCCCT GGCACCTAAA TATGCTGAAA AGCTGGGTTA TAAAGAGTTT
GACATTGTTA CTGTAAAAGG TGAAAATGGT TATACAATTG AATTGCCTGT GCTGATCCAG
CCCGGACAAG CTATGGGTAC TGCATCTATT GCTTTAGGCT ATGGACGTAC TAAGGTGGGT
AAGGCTGGTG ATAACGTTGG AAAAAATGCT TTCCCGTTTG TAAGCCTGGT TAACGGGACT
TCAAAGTACA CCACCACGGT AGAGCTTTCG GGAACGGGAA GAAGAGAAGA GCTTGCACAA
ACACAAACGC ACTATTCTTT TGAAGGCAGG AATGTAATCC GCGAGGCTAC ATTTGCAGAA
TATAAAAAGA ATCCGGCAGC TGGTTCAGGT AATGACCACG CTAAACATAA AACTTACGAT
TTATGGGATA AATACGAGAA ACCAGGCAAC AACTGGGTGA TGGCAATCGA TCTGAATGCT
TGTACAGGTT GTGGTTCTTG TATTGTTGCC TGTAACGTAG AAAATAACAT TCCGGTTGTA
GGCAAAGACG AAGTACGCAG ACGCAGGGAA ATGCACTGGA TCCGTATTGA CCGTTACTAC
AGCTTCAACC AGGAAGGTGA TGCCCATGCG GAGCATGCAG CACCTGGTCA TGGTAATGGT
ATTAATGCCG TAACTAAAGA AAAAGAGATT GCGCACCTGG ACGAGAACCA GATGAACAAT
GTTTCTGTTG TACATCAGCC GATGCTTTGT CAGCATTGCG ACCATGCACC ATGTGAAACA
GTTTGTCCGG TACTGGCAAC GGTACACTCA TCGGATGGTT TGAACCACAT GGCTTATAAC
CGTTGCGTAG GTACCCGTTA CTGTGCAAAC AACTGTCCAT ATAAAGTACG TCGTTTCAAC
TGGTTCAACT ACTGGAACGA TTCACGTTTT GACAATTACC TGAACAATGA ATTTACACAG
CTGGTGCTTA ACCCTGATGT AACTACACGT TCAAGAGGTG TGATGGAAAA ATGTTCGATG
TGTATCCAGC GTATCCAGGC TGGTAAACTG CAGGCCAAAA TTGAAAAACG TCCGTTGAAA
GATGGCGACA TCAAAATGGC ATGTCAGCAG GCTTGTTCGG CAAATGCCAT CATATTTGGT
GATTCCAATG ATCCGGAATC GGAAGTTTCC AAAGCATTAC GTAGTGAGCG CATTTACTAT
GTTTTAGAGG AGATCAACGT TCAGCCGGGA ATCGGTTATA TGACGAAAAT TAGAAATACA
GATACAACAG TACAAGCGTG A
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| Protein sequence | MESNKKYWKG LEEYNNTPDF VENNKNEFAE PLPIEDVLNE AGLSTVTPRR DFLKALGFGL
GAVTLAACQT APVHKAIPYV IKPEEVVPGI PNYYVSSFNG QPVLVKTREG RPIKIEANPN
AGVFNCGTDA QAQASVLDLY DVSKLKSPLL KENETTWAKV DEFVKGELNK AQASGKKIRI
VSSSVNSPST KAVIADFAAA YPNTKHVQYD AVSYTGIIKA NESTFGKAVV PKYKFDKADL
IVSFGADFLG TWISGEEFTA QYVSNRNHTS LKNGKMSRHF QFEAGMSLTG TNADTRVPVK
LSEEGPALIT LYNAITGSNL AGAALPNNVT ADKALKLVAK ELLQNKGKAL VVSGSNDIST
QILVNAINSA IGSYGTTIDL DNPNKRYAGN DAEFAEFINE MNKGEIAAVF FLDSNPVYDV
ANSKAFTEAL AKVALKVSFS DRKDETSTLC DVIAINHNYL EAWGDANIYE GYYSIVQPTI
NPVFNSRQAE ESLLTWSDAP VKEYYQYVRN NWEKNILPTF GKGWKEVLQA GVFAAAEKPA
GAYSVGLSLD AAAAAIVNNS KALAKNKVEL QVYESIPMRD GKHANNAFLQ ELPDPVSKVT
WDNYIALAPK YAEKLGYKEF DIVTVKGENG YTIELPVLIQ PGQAMGTASI ALGYGRTKVG
KAGDNVGKNA FPFVSLVNGT SKYTTTVELS GTGRREELAQ TQTHYSFEGR NVIREATFAE
YKKNPAAGSG NDHAKHKTYD LWDKYEKPGN NWVMAIDLNA CTGCGSCIVA CNVENNIPVV
GKDEVRRRRE MHWIRIDRYY SFNQEGDAHA EHAAPGHGNG INAVTKEKEI AHLDENQMNN
VSVVHQPMLC QHCDHAPCET VCPVLATVHS SDGLNHMAYN RCVGTRYCAN NCPYKVRRFN
WFNYWNDSRF DNYLNNEFTQ LVLNPDVTTR SRGVMEKCSM CIQRIQAGKL QAKIEKRPLK
DGDIKMACQQ ACSANAIIFG DSNDPESEVS KALRSERIYY VLEEINVQPG IGYMTKIRNT
DTTVQA
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