Gene Phep_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0286 
Symbol 
ID8251371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp333409 
End bp334539 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content44% 
IMG OID644933935 
Producthypothetical protein 
Protein accessionYP_003090573 
Protein GI255530201 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.809571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0827061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TTTCAATTTG TACCCTTTTT GTACTGATCA CTGCAAATGC ATTCGCACAA 
AAAAAACTGA TAGAACGTTA TTTATCCAAT AAAACAGACT CTTCAAGAAG GCCCAGCTTT
ATGCCTGTAC CAATTTTCAG GTACAGCCAG GAAATAGGTG TTGAATTTGG TGCCGGCCTC
CTTTATTCTA CTTATTTAGA CAGAAAGGAC CTCAGCAATC GCAGCTCCAA TTTCTCAGGT
GTAGTGTCAG CATCTACCAA AGGCCAGTAT AATGTATCCT TAAAAGGCGA TATCTGGACC
AAAAATAATA CACATCATTA CATTTCAGAA ATCCGCTTCA AACAGATGCC CTTTAATTTT
TATGGCATAG GTAACGAAAC AGATGAAGCA AATAAAGACA GGCTGGTACA GGGTTTTGTA
AAGGTGGTTC TGGAAGCCGA AAAAAGGTTT TGGCCGGCAA TGTATACCGG CTTTTCCCTC
GGATTTGAAA ATTATCATTT TACCGATAAA GAGGTCGGCG GTATATTTAC CACCGATCAG
GCTATCCTGC ACAAAACAGG CGGCTCTGTA GTTTATGCAG GCATTTCCCA AACCTATGAT
ACCAGGAATT CTAACAATTA CACCACAAAA GGGATGACGG CAAAAGTTTC TTTTCAATAC
GCACCGGATT TTTGGGGCAA AGAAAATTTT ACCGGCAGCC TCATTAAAGC TAATGTCCGC
AGTTTCTGGT CGCTCTCCCC AAAATTTGTG ATCGGTGTAA ACGGACTTTT TCATACCATC
CAGGGTAAAA ACACGCCTTT CTACTTATTG CCACAAATGG GTAACGACGA AATGATGCGG
GGTTATTATA CCGGCCGTTA CCGCGACAGG AACCTCCTGG CCGCACAGGC CGAACTCAGG
TACCGGTACA ACAACCGCTT TGGTGCAGTA GTTTTTGGTG GCGGCGGACA GGTATTTGAA
AACGGGGGTT TCGAAGTCAG AAACTTTAAA CCTTCCTATG GTGCAGGTGG CCGCTATTTC
TTTGACCCCG AAAAAGGTCT TAGTGTGCGC CTTGATTATG GAATCGGTGA GAAACGCCCT
AACGAAAAAC GCCAGACCGG ATTTTACATC AGCCTGGCAG AGGCCTTTTA A
 
Protein sequence
MKKLSICTLF VLITANAFAQ KKLIERYLSN KTDSSRRPSF MPVPIFRYSQ EIGVEFGAGL 
LYSTYLDRKD LSNRSSNFSG VVSASTKGQY NVSLKGDIWT KNNTHHYISE IRFKQMPFNF
YGIGNETDEA NKDRLVQGFV KVVLEAEKRF WPAMYTGFSL GFENYHFTDK EVGGIFTTDQ
AILHKTGGSV VYAGISQTYD TRNSNNYTTK GMTAKVSFQY APDFWGKENF TGSLIKANVR
SFWSLSPKFV IGVNGLFHTI QGKNTPFYLL PQMGNDEMMR GYYTGRYRDR NLLAAQAELR
YRYNNRFGAV VFGGGGQVFE NGGFEVRNFK PSYGAGGRYF FDPEKGLSVR LDYGIGEKRP
NEKRQTGFYI SLAEAF