Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0286 |
Symbol | |
ID | 8251371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 333409 |
End bp | 334539 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644933935 |
Product | hypothetical protein |
Protein accession | YP_003090573 |
Protein GI | 255530201 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.809571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0827061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TTTCAATTTG TACCCTTTTT GTACTGATCA CTGCAAATGC ATTCGCACAA AAAAAACTGA TAGAACGTTA TTTATCCAAT AAAACAGACT CTTCAAGAAG GCCCAGCTTT ATGCCTGTAC CAATTTTCAG GTACAGCCAG GAAATAGGTG TTGAATTTGG TGCCGGCCTC CTTTATTCTA CTTATTTAGA CAGAAAGGAC CTCAGCAATC GCAGCTCCAA TTTCTCAGGT GTAGTGTCAG CATCTACCAA AGGCCAGTAT AATGTATCCT TAAAAGGCGA TATCTGGACC AAAAATAATA CACATCATTA CATTTCAGAA ATCCGCTTCA AACAGATGCC CTTTAATTTT TATGGCATAG GTAACGAAAC AGATGAAGCA AATAAAGACA GGCTGGTACA GGGTTTTGTA AAGGTGGTTC TGGAAGCCGA AAAAAGGTTT TGGCCGGCAA TGTATACCGG CTTTTCCCTC GGATTTGAAA ATTATCATTT TACCGATAAA GAGGTCGGCG GTATATTTAC CACCGATCAG GCTATCCTGC ACAAAACAGG CGGCTCTGTA GTTTATGCAG GCATTTCCCA AACCTATGAT ACCAGGAATT CTAACAATTA CACCACAAAA GGGATGACGG CAAAAGTTTC TTTTCAATAC GCACCGGATT TTTGGGGCAA AGAAAATTTT ACCGGCAGCC TCATTAAAGC TAATGTCCGC AGTTTCTGGT CGCTCTCCCC AAAATTTGTG ATCGGTGTAA ACGGACTTTT TCATACCATC CAGGGTAAAA ACACGCCTTT CTACTTATTG CCACAAATGG GTAACGACGA AATGATGCGG GGTTATTATA CCGGCCGTTA CCGCGACAGG AACCTCCTGG CCGCACAGGC CGAACTCAGG TACCGGTACA ACAACCGCTT TGGTGCAGTA GTTTTTGGTG GCGGCGGACA GGTATTTGAA AACGGGGGTT TCGAAGTCAG AAACTTTAAA CCTTCCTATG GTGCAGGTGG CCGCTATTTC TTTGACCCCG AAAAAGGTCT TAGTGTGCGC CTTGATTATG GAATCGGTGA GAAACGCCCT AACGAAAAAC GCCAGACCGG ATTTTACATC AGCCTGGCAG AGGCCTTTTA A
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Protein sequence | MKKLSICTLF VLITANAFAQ KKLIERYLSN KTDSSRRPSF MPVPIFRYSQ EIGVEFGAGL LYSTYLDRKD LSNRSSNFSG VVSASTKGQY NVSLKGDIWT KNNTHHYISE IRFKQMPFNF YGIGNETDEA NKDRLVQGFV KVVLEAEKRF WPAMYTGFSL GFENYHFTDK EVGGIFTTDQ AILHKTGGSV VYAGISQTYD TRNSNNYTTK GMTAKVSFQY APDFWGKENF TGSLIKANVR SFWSLSPKFV IGVNGLFHTI QGKNTPFYLL PQMGNDEMMR GYYTGRYRDR NLLAAQAELR YRYNNRFGAV VFGGGGQVFE NGGFEVRNFK PSYGAGGRYF FDPEKGLSVR LDYGIGEKRP NEKRQTGFYI SLAEAF
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