Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0280 |
Symbol | |
ID | 8251365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 327403 |
End bp | 329049 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644933929 |
Product | Glucose-6-phosphate isomerase |
Protein accession | YP_003090567 |
Protein GI | 255530195 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0655697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCTA CAATAAATTT TACCGAAACC TCTGCGTATA AATACCTTGC CGATCACTTC ATCGACATCA ATAAAAAAAA CCTGAAAGAA CTTTTTGCTG AAGATGAATC CCGCTTTGAG AAGTTTTCTC TTTTATTTGA GGAGATCCTT GTCGATTATT CCAAAAACAG GATTGATGAC ACCACCCTTG CGCTGCTCAT CCAGCTGGCC CGCGAATGTA AACTTGATGA AGCCATTAAG GCCATGTTCA GCGGTGAAGA GATCAACCAG ACAGAAGGCC GGCCGGTACT CCACATTGCT TTGCGCAATC AGCGCAACAA AGAGATCCTG GTAAATGGCA AAGATGTGAT GCCTGAAGTC TATGCTGTGC TCGATAAAAT GGAAAAATTC AGCAACCAGA TTATTTCAGG TAGCTGGAAA GGATATACCG GAAAGGCCAT TACCGATGTG GTCAATATTG GCATAGGCGG TTCAGACCTG GGGCCGGTAA TGGTTACAGA AGCACTGCGC GCCTACAAGA ACCACCTGAA CATGCATTTC GTTTCCAATA TCGACGGCAC TCACATTGCA GAAACACTTA AAAAGGTTGA TCCGGAAACT ACATTGTTCC TCATCGCCTC CAAAACTTTT ACTACCCAGG AAACCATGAC CAATGCCAAT ACAGCGCGCG ACTGGTTTCT GGCAAATGGC GCTAAAAAAG AAGACATTGC CAAACACTTC GCCGCCTTAT CTACCAACGC CAAAGACGTT TCTGCTTTCG GTATCGACAC CGATAACATG TTTGAGTTTT GGGACTGGGT AGGCGGCAGG TACTCTTTAT GGAGCGCCAT CGGACTCCCT ATCGCACTGA GTGTGGGTTA CGACAATTTT AAACAGCTCC TGGCAGGTGC GCATGCAGCC GATGAACATT TCGAAAATGC TGAATTCGAG ATCAACATTC CTGTTATACT GGCTTTAATA GGGATATGGT ACATCAATTT CTTTGATGCA GAAACCCAGG CCATTTTGCC TTACGACCAG TATATGCACC GCTTTGCGGC TTATTTCCAG CAGGGCGATA TGGAAAGCAA TGGCAAACAT GTAGACCGTA ACGGTCATGA TGTGACCTAC GAAACAGGTC CGGTCATCTG GGGCGAACCC GGCACCAACG GCCAGCATGC ATTTTACCAG CTCATCCACC AGGGTACCCG AATTATCCCA TGCGACTTTA TTGCACCGGC ACAAAGCTTA AACCCCATTG GCAACCACCA TCCGATTCTT TTATCCAATT TCTTCGCACA AACCGAAGCT TTAATGAATG GTAAAACCAA GGAGGAAGTT GTTGCAGAGC TTAAAAAAGA AGGTAAAACA GCCGAAGAAA TTGAAAAACT GGCTCCCTTT AAAGTGTTTG AAGGAAACAG GCCAACCAAC TCTATTCTGC TGAAAAAGGT TACACCTTTT AGTCTGGGTA GCCTCATTGC CCTATACGAA CACAAGATAT TTGTACAGGG TATCATCTGG AATATCTTTA GCTTCGACCA GTGGGGTGTA GAATTGGGCA AACAACTGGC CAAGAGCATA TTGCCTGAAC TGGACAATGA TAATGAAGTA GCCTCACATG ATGGCTCAAC AAACGGACTG ATCAATCAAT ATAAAAGCTG GAGGTAA
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Protein sequence | MLPTINFTET SAYKYLADHF IDINKKNLKE LFAEDESRFE KFSLLFEEIL VDYSKNRIDD TTLALLIQLA RECKLDEAIK AMFSGEEINQ TEGRPVLHIA LRNQRNKEIL VNGKDVMPEV YAVLDKMEKF SNQIISGSWK GYTGKAITDV VNIGIGGSDL GPVMVTEALR AYKNHLNMHF VSNIDGTHIA ETLKKVDPET TLFLIASKTF TTQETMTNAN TARDWFLANG AKKEDIAKHF AALSTNAKDV SAFGIDTDNM FEFWDWVGGR YSLWSAIGLP IALSVGYDNF KQLLAGAHAA DEHFENAEFE INIPVILALI GIWYINFFDA ETQAILPYDQ YMHRFAAYFQ QGDMESNGKH VDRNGHDVTY ETGPVIWGEP GTNGQHAFYQ LIHQGTRIIP CDFIAPAQSL NPIGNHHPIL LSNFFAQTEA LMNGKTKEEV VAELKKEGKT AEEIEKLAPF KVFEGNRPTN SILLKKVTPF SLGSLIALYE HKIFVQGIIW NIFSFDQWGV ELGKQLAKSI LPELDNDNEV ASHDGSTNGL INQYKSWR
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