Gene Phep_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0278 
Symbol 
ID8251363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp325629 
End bp326723 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content45% 
IMG OID644933927 
Productglutamine cyclotransferase 
Protein accessionYP_003090565 
Protein GI255530193 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3823] Glutamine cyclotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.286822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTG GCCAAGTTAA AAATACCATA GGCAGGGCGG CACTGCCGTT TTGTTTGCTG 
TTTAGTTTAT TGTTTGTGAT CGCCTGTAAG GACAGCGCAA CTGTACCGGG AATTGCGTTT
AAATTTCCTG AGCAGGGCCA GTCGTTCGGA CTTGGCGAGG ACGTAAAGAT TGGACTGGAT
GTTCCTGAAG GGACAACTAT CACCTCTGCT ACCTATTTGC TGGACGGCAA AGCAGTGGCC
ACAAAGCCCA ATGGCGAAGC GGTTTCTGTA AATACCAAGG GGCTTTCATT AGGCTACAAG
CTGATTACAG CAGTAGTGGA CAATGGCAGT AAAAAAGATA CGCTGACGAT TAATATAGAA
CTTAAATCGG CCCTGAAGCC TGAACTGTAT GGTTACCAGG TGGTAAAGAC CTTGCCGCAT
GATACTTCGG CCTATACCCA GGGCCTGGAA TATCATAATG GCCGGTTTCT GGAAAGTACA
GGTCAGGAGC AGCATTCGAC CTTACGCTGG GTTGATGTTG CATCAGGAAA AGTATTACAG
CAGATCAAAC TGGAAGACCA GTACTTTGGT GAAGGCTCGA GTCTGGTTGG GGATAAAGTG
GTCATGCTGA CCTGGCAAAA TAAGCTGGGT TTGATATTTG ATGCAAAATC ATTTAAACAA
TTGTCTACTT TCCCTTATCA GTCCAGCATG GAGGGGTGGG GCTTGTGTTT TGATGGAATT
CAGCTGATCA AATCAGATGG CACGAATAGA CTCTGGTTCC TGAATAAAGA TACCTATAAG
GAAGAACGTT CGATAGAAGT TTATGACAAC AATGGCCCTG TAGATTCGTT GAACGAGCTG
GAATACATAG ATGGTAAGAT CTATGCGAAC GTGTATACCA AGAATATCAT TGTAGTGATT
GATCCTGAAT CAGGAGTAAT TGAAAAACAG ATTGATTTTT CAGGTCTGCT GCCTGCAGAT
TATTTTAAAA CCGATGACGA GCGGGGGAAC AATGTGCTGA ACGGAATTGC CTGGGACAAG
GCAGGTAAAC GCTTGTTTGT GACGGGGAAA AAATGGCCAC ATCTGTTTGA GGTGAAGCTG
GTTCCTAAGA AATAA
 
Protein sequence
MHFGQVKNTI GRAALPFCLL FSLLFVIACK DSATVPGIAF KFPEQGQSFG LGEDVKIGLD 
VPEGTTITSA TYLLDGKAVA TKPNGEAVSV NTKGLSLGYK LITAVVDNGS KKDTLTINIE
LKSALKPELY GYQVVKTLPH DTSAYTQGLE YHNGRFLEST GQEQHSTLRW VDVASGKVLQ
QIKLEDQYFG EGSSLVGDKV VMLTWQNKLG LIFDAKSFKQ LSTFPYQSSM EGWGLCFDGI
QLIKSDGTNR LWFLNKDTYK EERSIEVYDN NGPVDSLNEL EYIDGKIYAN VYTKNIIVVI
DPESGVIEKQ IDFSGLLPAD YFKTDDERGN NVLNGIAWDK AGKRLFVTGK KWPHLFEVKL
VPKK