Gene Phep_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0273 
Symbol 
ID8251358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp320399 
End bp321586 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content47% 
IMG OID644933922 
Productamidohydrolase 
Protein accessionYP_003090560 
Protein GI255530188 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACCA AAGACAAGAT ACAGGCACTT TCAGGTAATA TATTTGAACA GGTTGTTGGC 
TACCGCCAGC ATTTACATGC CAATCCGGAA CTTTCTTTTA AAGAATACCA GACTTCAGCT
TTTGTGAAAG GCATTTTGAC GGACTGGGGC ATTCCATTTA CAGAAATGGC TGATACGGGT
GTTGTGGGGT TGATCAAAGG TGAACTGGCT TCGGATAAGA TCATCGCCCT GCGTGCCGAT
ATGGACGCAT TGCCGATAAT AGAGGCAAAC GATAAACCTT ATGCGTCTAA GAACCCAGGT
GTGATGCATG CCTGCGGACA TGATGTGCAC ACCTCTTCTT TGCTGGGAAC GGCGCATATT
TTAAATCAGT TAAAGTCGGA ATTTGGGGGT ACAGTAAAAC TGATCTTCCA GCCTGCTGAA
GAGATTTTAC CGGGTGGTGC AAGCATTATG ATCAAGGAGG GCGTGTTGGA AAACCCCAAG
CCGCAGCACA TTATCGGCCA GCATGTGATG CCACTGATTG ATGCCGGTAA GGTAGGTTTC
CGTTCGGGCA TTTATATGGC CTCTACAGAT GAGCTGTATG TAACGGTACG AGGCAAAGGC
GGACATGGTG CGCAGCCACA TCAGAATATA GATCCTGTAC TGATCGCTTC GCATATTATT
GTGGCTTTGC AGCAGATTGT AAGCAGAAAT GCAGATCCAC GTTTGCCTTC GGTACTTTCC
TTTGGTAAGG TAATTGCCAA TGGGGCAACG AACATCATCC CGAATGAGGT AAAACTGGAA
GGGACTTTCA GGACATTGAA TGAGGACTGG CGCAAGGAAG CGAAGCGCCT GATGAAAAAG
ATGGCTGAAG GTATTGCGGA AAGCATGGGC GGGAGCTGTG AGTTTACCAT TATGGATGGC
TACCCCTACC TGATCAATGA AGAAAAGGTA ACGGCCAATA CGCGCGCTTT TGCAGAAGAT
TACCTGGGCA AAGAGAATGT ACTTGACCTG GACATCTGGA TGGCGGCAGA GGATTTTGCC
TATTATTCGC AGGTTACAGA TGCCTGCTTT TACCGTTTGG GTACAGGGAA CAAAGAAAAG
GATACCTGTT ATTCGGTGCA TACGCCGAAT TTTGATATAG ACGAGGATGC ACTGAAGGTA
TCTACTGGTC TGATGGCTTA TGTAGCCCTG AAACAACTGG GCAATTAA
 
Protein sequence
MITKDKIQAL SGNIFEQVVG YRQHLHANPE LSFKEYQTSA FVKGILTDWG IPFTEMADTG 
VVGLIKGELA SDKIIALRAD MDALPIIEAN DKPYASKNPG VMHACGHDVH TSSLLGTAHI
LNQLKSEFGG TVKLIFQPAE EILPGGASIM IKEGVLENPK PQHIIGQHVM PLIDAGKVGF
RSGIYMASTD ELYVTVRGKG GHGAQPHQNI DPVLIASHII VALQQIVSRN ADPRLPSVLS
FGKVIANGAT NIIPNEVKLE GTFRTLNEDW RKEAKRLMKK MAEGIAESMG GSCEFTIMDG
YPYLINEEKV TANTRAFAED YLGKENVLDL DIWMAAEDFA YYSQVTDACF YRLGTGNKEK
DTCYSVHTPN FDIDEDALKV STGLMAYVAL KQLGN