Gene Phep_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0267 
Symbol 
ID8251352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp312502 
End bp313776 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content46% 
IMG OID644933916 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_003090554 
Protein GI255530182 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTT TACTATTAGG TTCCGGTGGC AGAGAAAGTG CTTTTGCCTG GAAGATCAGT 
CAATCTTCGC AATGCTCACA ACTGTTTATC GCGCCAGGTA ATGGCGGCAC CAATGCTTAC
GGTAAAAATG TAAACATTAA CCCCAATAAC TTTGAGGCTG TTAAGGCACT GGTACTTAAA
GAAAATATAA GCCTGGTGGT AGTTGGCCCT GAAGAGCCGC TTGTGAATGG AATCCACGAT
TTTTTTATAG CAGATGAGGA ACTGGCCGGC ATCCCGGTTA TCGGTCCTAA AAAAGAAGGT
GCGATCCTTG AGGGCAGTAA AGATTTCTCA AAGCAGTTTA TGGCCCGTCA TGGAATTCCT
ACTGCCGCTT CACGCTCTTT TACAAAGGAA ACACTGGAGG AAGGACTGGT CTATTTGCAA
TCGCATGCCC TGCCTGTTGT TTTAAAGGCA GACGGACTTG CAGCCGGCAA AGGGGTACTG
ATTTTAGACA ATACTGCCGA AGCCCAGGAG GAACTGAAAC TGATGCTGAG CGGCAAGTTT
GGCGACGCAG GGACGACCGT TGTAATAGAA GAATTTTTAA GCGGCATAGA GCTTTCGGTA
TTTGTACTTA CCGATGGGGA CAATTATGTG ATCCTGCCGG AGGCGAAAGA TTACAAACGC
ATCGGACAGG GGGATACCGG CCTGAATACG GGCGGCATGG GTTCTGTATC TCCGGTACCT
TTTGCCAGCA AAGCTTTTTT AGCCGAGATA GAACGCGACA TCATCATCCC AACCATCAAT
GGCTTAAAGA AAGACCAAAT TGATTATACC GGTTTCATCT TTTTCGGATT GATCAAGGTA
AACGAAAAAC CACTGGTAAT AGAGTACAAC TGCCGCATGG GCGACCCTGA AACGGAAAGT
GTGATCCCAA GGATAGAAAA TGACCTGGTA GATCTTTTTA TTGCGGCCTC AAAGAAAAAA
TTAAAAGATT ATAAATTAAA CATCAGTGAT AAAAATGCCG CTACTGTAAT GATTGTTGCC
GGGGGTTATC CTGGCGAATA TGAAAAGGGC AAAACCATCA CTGGCATCGA AAATGTACGC
CAGTCGCTGG TGTTCCATGC CGGAACTGCC CTGGAAGGTG GTGTGATCAA AACCAATGGG
GGCCGCGTAC TCGCCGTTTC CAGTTTGCAG GACAGTCAGT TTGAAGCTTT GCAGTCAGCA
ACTGCTGATG CGGCACGCAT TTATTTTGAT GGCAAATATT TCAGGGAAGA TATAGGATTT
GACCTGATCT CCTAA
 
Protein sequence
MNILLLGSGG RESAFAWKIS QSSQCSQLFI APGNGGTNAY GKNVNINPNN FEAVKALVLK 
ENISLVVVGP EEPLVNGIHD FFIADEELAG IPVIGPKKEG AILEGSKDFS KQFMARHGIP
TAASRSFTKE TLEEGLVYLQ SHALPVVLKA DGLAAGKGVL ILDNTAEAQE ELKLMLSGKF
GDAGTTVVIE EFLSGIELSV FVLTDGDNYV ILPEAKDYKR IGQGDTGLNT GGMGSVSPVP
FASKAFLAEI ERDIIIPTIN GLKKDQIDYT GFIFFGLIKV NEKPLVIEYN CRMGDPETES
VIPRIENDLV DLFIAASKKK LKDYKLNISD KNAATVMIVA GGYPGEYEKG KTITGIENVR
QSLVFHAGTA LEGGVIKTNG GRVLAVSSLQ DSQFEALQSA TADAARIYFD GKYFREDIGF
DLIS