Gene Phep_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0262 
Symbol 
ID8251347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp308031 
End bp308993 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content45% 
IMG OID644933912 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003090550 
Protein GI255530178 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTGG TTACCGGTGC CACTGGTTTT TTAGGTTCAG AATTGATAAG CCAGCTGTGC 
AGGCAGGGCA TAAAGGTCAG GGCATTGAAA CGGGAGGGTT CCGTTATCCC TGATTTAATC
AGGCAGAATG ACCTTGTTGA ATGGGTTATT GCCGACATCA ACAACATTTC TGATCTGGAA
GATGCTTATG CAGGGATTAA GCAGGTATAT CATTGTGCAG CCCTGGTTTC ATTTAATCCT
AAAGACAAAC AAAAACTTTT ACACGTTAAC ATTGAAGGGA CCAGCAATGT GGTAAACCTT
TGTGCTGCTT ATGGGGCAAG ACTGCTGCAT GTGAGTTCGG TGGCCGCATT GGGCGAAGCT
AAAAAGGGGG CCCTGATTAC CGAAAAAGAT TTCTGGGCCT ATGATGCGAA GTCGCACACG
TATGCCATTT CTAAATACGA AGGAGAAATG GAAGTATGGC GGGGTATTGC AGAAGGGCTG
GATGCGGTAA TTGTAAACCC ATCGGTAATT ATTGGTGCAG GAGCGGGTTT TAAGGGTAGC
GGTGCCATTT TTAAACTGGT AAAGGATGGC TTATCCTTTT ATACCAGAGG TGCTACCGGA
CTTGTTGATG TGGAAGACGT GGCAAAAAGC ATGATTGCCC TGATGAACAG CAGCGAAACT
GCCGAACGGT TCACGATCTC ATCAGAAAAT TACCATTATA AACAGCTGTT TGCTGAAATC
GCCAAGGCTT ATGGCATTAA AGCCCCTGCA AAAGAAGCCA GGCCCTGGAT GCTGGGTATT
GCCTGGCGGG CAGCCTGGCT GGCCTCGCTC TTTACCGGGA AACCAGCTTC TTTAACCAAT
GATGCTGCCC GCAGCAGTTT AAATGAAAGT TTATACAGCA ACGAAAAGAT AAAAAAGGCA
ATTGGCATCA ACTTTAAGCC ATTGCAACAA AGTATTGAAG AAATCTGTAA ACAGCAGTAT
TGA
 
Protein sequence
MILVTGATGF LGSELISQLC RQGIKVRALK REGSVIPDLI RQNDLVEWVI ADINNISDLE 
DAYAGIKQVY HCAALVSFNP KDKQKLLHVN IEGTSNVVNL CAAYGARLLH VSSVAALGEA
KKGALITEKD FWAYDAKSHT YAISKYEGEM EVWRGIAEGL DAVIVNPSVI IGAGAGFKGS
GAIFKLVKDG LSFYTRGATG LVDVEDVAKS MIALMNSSET AERFTISSEN YHYKQLFAEI
AKAYGIKAPA KEARPWMLGI AWRAAWLASL FTGKPASLTN DAARSSLNES LYSNEKIKKA
IGINFKPLQQ SIEEICKQQY