Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0262 |
Symbol | |
ID | 8251347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 308031 |
End bp | 308993 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644933912 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003090550 |
Protein GI | 255530178 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTGG TTACCGGTGC CACTGGTTTT TTAGGTTCAG AATTGATAAG CCAGCTGTGC AGGCAGGGCA TAAAGGTCAG GGCATTGAAA CGGGAGGGTT CCGTTATCCC TGATTTAATC AGGCAGAATG ACCTTGTTGA ATGGGTTATT GCCGACATCA ACAACATTTC TGATCTGGAA GATGCTTATG CAGGGATTAA GCAGGTATAT CATTGTGCAG CCCTGGTTTC ATTTAATCCT AAAGACAAAC AAAAACTTTT ACACGTTAAC ATTGAAGGGA CCAGCAATGT GGTAAACCTT TGTGCTGCTT ATGGGGCAAG ACTGCTGCAT GTGAGTTCGG TGGCCGCATT GGGCGAAGCT AAAAAGGGGG CCCTGATTAC CGAAAAAGAT TTCTGGGCCT ATGATGCGAA GTCGCACACG TATGCCATTT CTAAATACGA AGGAGAAATG GAAGTATGGC GGGGTATTGC AGAAGGGCTG GATGCGGTAA TTGTAAACCC ATCGGTAATT ATTGGTGCAG GAGCGGGTTT TAAGGGTAGC GGTGCCATTT TTAAACTGGT AAAGGATGGC TTATCCTTTT ATACCAGAGG TGCTACCGGA CTTGTTGATG TGGAAGACGT GGCAAAAAGC ATGATTGCCC TGATGAACAG CAGCGAAACT GCCGAACGGT TCACGATCTC ATCAGAAAAT TACCATTATA AACAGCTGTT TGCTGAAATC GCCAAGGCTT ATGGCATTAA AGCCCCTGCA AAAGAAGCCA GGCCCTGGAT GCTGGGTATT GCCTGGCGGG CAGCCTGGCT GGCCTCGCTC TTTACCGGGA AACCAGCTTC TTTAACCAAT GATGCTGCCC GCAGCAGTTT AAATGAAAGT TTATACAGCA ACGAAAAGAT AAAAAAGGCA ATTGGCATCA ACTTTAAGCC ATTGCAACAA AGTATTGAAG AAATCTGTAA ACAGCAGTAT TGA
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Protein sequence | MILVTGATGF LGSELISQLC RQGIKVRALK REGSVIPDLI RQNDLVEWVI ADINNISDLE DAYAGIKQVY HCAALVSFNP KDKQKLLHVN IEGTSNVVNL CAAYGARLLH VSSVAALGEA KKGALITEKD FWAYDAKSHT YAISKYEGEM EVWRGIAEGL DAVIVNPSVI IGAGAGFKGS GAIFKLVKDG LSFYTRGATG LVDVEDVAKS MIALMNSSET AERFTISSEN YHYKQLFAEI AKAYGIKAPA KEARPWMLGI AWRAAWLASL FTGKPASLTN DAARSSLNES LYSNEKIKKA IGINFKPLQQ SIEEICKQQY
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