| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0259 |
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| Symbol | |
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| ID | 8251344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 304507 |
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| End bp | 305571 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933909 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_003090547 |
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| Protein GI | 255530175 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.581012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATA CACTTGATAT GACGATCACT AAGGCCGAAC AGAGCAGGCT TACGGTAACT
GATTTTTCTC AGTTGCCATT TGGGAAGGTA TTTTCTGACC ATATGTTTAT TGCGGAATTT
GATAACGGAA CCTGGGGTAA TCTGCAGGTC GTTCCTTACG GTCCTATTCC AATGAGCCCG
GCAATTTCTG CGCTGCATTA CGGACAGGCG ATTTTTGAAG GGATGAAAGC TTATCGTCAG
GCCAATGGCA AAATCAGTGT CTTCAGACCG GAGAAAAACT TTGAACGCTT TAATAAATCG
GCAGTACGTA TGTCTATGCC CGAGATTCCT AAAGAGATTT TCATGCAGGG GATTGCTGCT
TTAATTGATA TTGATGAAAA ATGGATCCCT GCACAGGATG GCTACTCTTT ATACATCCGT
CCGGTAATGT TTGCTACCGA CCCCTATTTG GGCGTTAAAC CATCAGATAA GTATATTTTC
GCGTTATTAA CTACCCCAAC AGGGGCGTAT TACAGCAAGG CTTTAAAAGT AAAGATTGAA
ACTGAATATA CCCGTGCAGA TGATGGTGGT GTTGGTTATG CCAAAACTGC CGGAAACTAT
GCCCGTTCTT TATACCCTTT TGCCGAGGCA CAGAAAGAGG GATTTGACCA ACTGATCTGG
ACAGATGCAG CTACACATGA ATTTATTGAA GAGGCCGGAA CAGCAAACCT GATCTTTGTG
ATCAATGGTA AACTGGTTAC CCCATCTGTA AGGAGTACAG TTTTAGACGG GGTAACCCGG
GATACTATTA TTCAGCTGGC CAAAAAAGCC GGTATTGAAG TAGAAGAAAG ACGGGTAAGT
GTAAAAGAAG TAATTGCAGG AATTGAAAAC GGAAGCCTGA CTGATGCTTT TGCAGCAGGT
ACTGCCGCAA CAGTTACCCC AATAGGTGAA ATTGGCTACC AGGGTAAAAC TTATAAGTTA
TCTGATCCTG CAACCCGTAC CATTTCTGCA GGTATCGCCA AAACGTTAAA CGATATCCGT
TATGGTCTGG CTCCGGATGA GTTTGGCTGG AACTGGGTAG TGTAA
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| Protein sequence | MNDTLDMTIT KAEQSRLTVT DFSQLPFGKV FSDHMFIAEF DNGTWGNLQV VPYGPIPMSP
AISALHYGQA IFEGMKAYRQ ANGKISVFRP EKNFERFNKS AVRMSMPEIP KEIFMQGIAA
LIDIDEKWIP AQDGYSLYIR PVMFATDPYL GVKPSDKYIF ALLTTPTGAY YSKALKVKIE
TEYTRADDGG VGYAKTAGNY ARSLYPFAEA QKEGFDQLIW TDAATHEFIE EAGTANLIFV
INGKLVTPSV RSTVLDGVTR DTIIQLAKKA GIEVEERRVS VKEVIAGIEN GSLTDAFAAG
TAATVTPIGE IGYQGKTYKL SDPATRTISA GIAKTLNDIR YGLAPDEFGW NWVV
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