Gene Phep_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0256 
Symbol 
ID8251341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp299978 
End bp300814 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content43% 
IMG OID644933906 
Producthypothetical protein 
Protein accessionYP_003090544 
Protein GI255530172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTT TCAGGAATTA TTTGGCTGTG CTGCTGTGTT TGCTGGTTCT TGCCGGTTGC 
AAGAAGATTG CAATGGATGA TTCGTTCTTA AAACCCCGCA GGGTTTACGA CCTGGCAGTT
GAAGGAGGTT TTAATACCCT TGGCACAGCG CAGTACATCA GGCTGACCAA GCCGGCCTTG
CATCCGGATT CTATACCAAA ACCTATCGTA AAAGCCTCTG TTGTGGTGAA TGATGGAAAA
ACAGATATTG TGTTCAGGGA AACCACTACA CCCGGGGTTT ATCAGGGCAC CAACAGAAAT
GACCCTAACT ATAACAATGC CTATACTTTA ACCATTAAAT ACAACGGTAA AACCTATACA
GCCGTAGATA CACTAAGGCA GGTAGTGAAT ATTGTAGACG ATTTTCTACC ATTGTCTACC
CACCTGCAAG CCGATAAGAC CATACAGGGA ACTATTCCTA AACATACATT TGGGTACCTT
AATCCCAACA AATGGTTCAT TGCTTACCAG GATATCCCTT TGTGGAACCC TGCAAAATTT
GATCAGACCA AATACTATAG CTATACGCAT CTTCTGGGCT CACCAAATTC GCTGTATCCG
CTGAATAACC TCAAAAGGAC CTTCACAGTA GGCCAGGAAG ATTTTATCAC CATTTATAAG
ATCTCACTTT CAGAAAATTA TGCCCGGTAT CTATATTCTG TATTTATGGA AACCGACTGG
AGCGGGTTAT TTTCCAGTGT ACCGGTTAAT GTGGAAGGTA ATATATCGGG TAATGCACAG
GGATATTTTT CTGTAAGTGA TGTAGATGCC AGGCGATACA AGGCCAAAGA ACTGTAG
 
Protein sequence
MKGFRNYLAV LLCLLVLAGC KKIAMDDSFL KPRRVYDLAV EGGFNTLGTA QYIRLTKPAL 
HPDSIPKPIV KASVVVNDGK TDIVFRETTT PGVYQGTNRN DPNYNNAYTL TIKYNGKTYT
AVDTLRQVVN IVDDFLPLST HLQADKTIQG TIPKHTFGYL NPNKWFIAYQ DIPLWNPAKF
DQTKYYSYTH LLGSPNSLYP LNNLKRTFTV GQEDFITIYK ISLSENYARY LYSVFMETDW
SGLFSSVPVN VEGNISGNAQ GYFSVSDVDA RRYKAKEL