Gene Phep_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0254 
Symbol 
ID8251339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp296442 
End bp297437 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content40% 
IMG OID644933904 
ProductFecR protein 
Protein accessionYP_003090542 
Protein GI255530170 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.421619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAT TTGAAACTAA TGAAGAATTG ATATACGCCC TGATCATTGA TGATCTGGAT 
GGATCAATTA CAGCCGAAAA TAAGCTGCTC CTGGAACAAT GGAGAACCGC TGATGCGGAC
CATGAAAAAA CTTATCAGGA TTTTCTAGAT GTACAGACAG GTATGGATAA ACTGTACAAA
AAAAACGGAT ATGACCCACA GGAATCCTGG AAATCGCTGG ATAAAAAAAT AACCCTGCTG
GAGGATGACC GTTTTGCAGC GGTTAAACCC TTGCGCCATA AGGGTATATG GTATAAAGTT
GCGGCCGCTG TGCTGCTTAT TTGTGGATTG GGGTATTATT TTATAGTACA AAACGGGTAT
GTGGTGATCT CGACCGCCGG GAATGCGGCA ATAACCCGTA TTGTTTTGCC CGATGGCACA
GAAGTAAACC TCAATGCAGC AACAAAAATA AGGTACAATA AAAATAATTT TGCAGGCGAC
AGAAAGCTCG AACTGTTAAC CGGAGAAGTA TTTATTCATG TGGTAAGCCA TACTTCATCC
CGTTTCAGGG TTGATTTAGG GGACATTGAA GCCGAAGATA TTGGCACAAG TTTTAATGTG
ATCAGAAATG ATGATAAAAT AGCTGTAGTT GTTGAAGAAG GAAAAGTGGC TTTAAAGCAC
CTGGATTTAA ACCGGGAAAT CCTGTTAACT GCCGGAAAAC TTGGTGTATA TGATACAAAA
AGAAAAATGC TGGTTGCGGC CGATAATTTA AATGTAAACT ATAAAGCCTG GGTAGATAAG
GATTTTATTT TTCAGGAAGT TCCGGTGGAT CAGGTTGCAG AGCAGCTGGA AAAGGTATAT
CAGATCCCTA TCGATATCAA AGGAGCGCTG AAAGATAGAA AGTTAACAGC AAGGTTACAT
TATCAAACTT TAGATAGTGC ACTTGCCGTA ATTTCCGCAT CTTTGCAATG CAAAGTAATA
AAGGAAAAGG ACACTTATGT TTTATCGGAT AATTAG
 
Protein sequence
MKQFETNEEL IYALIIDDLD GSITAENKLL LEQWRTADAD HEKTYQDFLD VQTGMDKLYK 
KNGYDPQESW KSLDKKITLL EDDRFAAVKP LRHKGIWYKV AAAVLLICGL GYYFIVQNGY
VVISTAGNAA ITRIVLPDGT EVNLNAATKI RYNKNNFAGD RKLELLTGEV FIHVVSHTSS
RFRVDLGDIE AEDIGTSFNV IRNDDKIAVV VEEGKVALKH LDLNREILLT AGKLGVYDTK
RKMLVAADNL NVNYKAWVDK DFIFQEVPVD QVAEQLEKVY QIPIDIKGAL KDRKLTARLH
YQTLDSALAV ISASLQCKVI KEKDTYVLSD N