Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0254 |
Symbol | |
ID | 8251339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 296442 |
End bp | 297437 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644933904 |
Product | FecR protein |
Protein accession | YP_003090542 |
Protein GI | 255530170 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.421619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAT TTGAAACTAA TGAAGAATTG ATATACGCCC TGATCATTGA TGATCTGGAT GGATCAATTA CAGCCGAAAA TAAGCTGCTC CTGGAACAAT GGAGAACCGC TGATGCGGAC CATGAAAAAA CTTATCAGGA TTTTCTAGAT GTACAGACAG GTATGGATAA ACTGTACAAA AAAAACGGAT ATGACCCACA GGAATCCTGG AAATCGCTGG ATAAAAAAAT AACCCTGCTG GAGGATGACC GTTTTGCAGC GGTTAAACCC TTGCGCCATA AGGGTATATG GTATAAAGTT GCGGCCGCTG TGCTGCTTAT TTGTGGATTG GGGTATTATT TTATAGTACA AAACGGGTAT GTGGTGATCT CGACCGCCGG GAATGCGGCA ATAACCCGTA TTGTTTTGCC CGATGGCACA GAAGTAAACC TCAATGCAGC AACAAAAATA AGGTACAATA AAAATAATTT TGCAGGCGAC AGAAAGCTCG AACTGTTAAC CGGAGAAGTA TTTATTCATG TGGTAAGCCA TACTTCATCC CGTTTCAGGG TTGATTTAGG GGACATTGAA GCCGAAGATA TTGGCACAAG TTTTAATGTG ATCAGAAATG ATGATAAAAT AGCTGTAGTT GTTGAAGAAG GAAAAGTGGC TTTAAAGCAC CTGGATTTAA ACCGGGAAAT CCTGTTAACT GCCGGAAAAC TTGGTGTATA TGATACAAAA AGAAAAATGC TGGTTGCGGC CGATAATTTA AATGTAAACT ATAAAGCCTG GGTAGATAAG GATTTTATTT TTCAGGAAGT TCCGGTGGAT CAGGTTGCAG AGCAGCTGGA AAAGGTATAT CAGATCCCTA TCGATATCAA AGGAGCGCTG AAAGATAGAA AGTTAACAGC AAGGTTACAT TATCAAACTT TAGATAGTGC ACTTGCCGTA ATTTCCGCAT CTTTGCAATG CAAAGTAATA AAGGAAAAGG ACACTTATGT TTTATCGGAT AATTAG
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Protein sequence | MKQFETNEEL IYALIIDDLD GSITAENKLL LEQWRTADAD HEKTYQDFLD VQTGMDKLYK KNGYDPQESW KSLDKKITLL EDDRFAAVKP LRHKGIWYKV AAAVLLICGL GYYFIVQNGY VVISTAGNAA ITRIVLPDGT EVNLNAATKI RYNKNNFAGD RKLELLTGEV FIHVVSHTSS RFRVDLGDIE AEDIGTSFNV IRNDDKIAVV VEEGKVALKH LDLNREILLT AGKLGVYDTK RKMLVAADNL NVNYKAWVDK DFIFQEVPVD QVAEQLEKVY QIPIDIKGAL KDRKLTARLH YQTLDSALAV ISASLQCKVI KEKDTYVLSD N
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